RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RASL12Q9NYN1 266 aa6.97□□□□□ -1.29
HMGXB4-207ENST00000498212 SLC22A13Q9Y226 551 aa6.97□□□□□ -1.29
HMGXB4-207ENST00000498212 POLDIP2Q9Y2S7 368 aa6.97□□□□□ -1.29
HMGXB4-207ENST00000498212 CAB39Q9Y376 341 aaPredicted RBP6.97□□□□□ -1.29
HMGXB4-207ENST00000498212 ANK2Q01484 3957 aa6.96□□□□□ -1.29
HMGXB4-207ENST00000498212 A0A1B0GTI1 187 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 A0A1B0GUS0 222 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 PQLC2LA1A4F0 135 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 A6NIN4 97 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 METTL15A6NJ78 407 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 RFPL4AA6NLU0 287 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 RFPL4AL1F8VTS6 287 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 RNASEK-C17orf49H0YIS7 233 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 J3QT63 122 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 M0R1W7 72 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 WIPF1O43516 503 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 SPRY1O43609 319 aaPredicted RBP6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 SYNGR1O43759 233 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 SULT1C4O75897 302 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 CCL1P22362 96 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 EEF1B2P24534 225 aaKnown RBP6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 IER3P46695 156 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 RPL15P61313 204 aaKnown RBP6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 KLRD1Q13241 179 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 TMED1Q13445 227 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 BLMHQ13867 455 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ODF4Q2M2E3 257 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 SMIM21Q3B7S5 101 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 C1orf122Q6ZSJ8 110 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 Q6ZSR3 168 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 CATSPERDQ86XM0 798 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF561Q8N587 486 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 Q8N7P7 452 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 OR4F5Q8NH21 305 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 NPRL2Q8WTW4 380 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 DYRK2Q92630 601 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 RFKQ969G6 155 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 SDSLQ96GA7 329 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF488Q96MN9 340 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 PLEKHA1Q9HB21 404 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ELL3Q9HB65 397 aaPredicted RBP6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 IMPAD1Q9NX62 359 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF222Q9UK12 451 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 FAM96BQ9Y3D0 163 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 MAB21L2Q9Y586 359 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 ORC6Q9Y5N6 252 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 MMP24Q9Y5R2 645 aa6.96□□□□□ -1.3
HMGXB4-207ENST00000498212 TENM1Q9UKZ4 2725 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 TRBV23-1A0A0A0MS06 115 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 A0A1W2PRD5 423 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 A0A1W2PRF3 423 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 A0A1W2PRM7 423 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ANKRD61A6NGH8 418 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 H3BSH0 61 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 SLC1A7O00341 560 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 EI24O14681 340 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NPFFO15130 113 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 SYT7O43581 403 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NOS1APO75052 506 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NXPH2O95156 264 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NDUFA7O95182 113 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 KNG1P01042 644 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 IGHV4-59P01825 116 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ALPLP05186 524 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 FBP1P09467 338 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 PGA5P0DJD9 388 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 CAPZA1P52907 286 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 RAG2P55895 527 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 DLX1P56177 255 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 PRB3Q04118 309 aaPredicted RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 KPNB1Q14974 876 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ZFP1Q6P2D0 407 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 CCDC121Q6ZUS5 278 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 FAM220AQ7Z4H9 259 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 FAM185AQ8N0U4 392 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 BATF2Q8N1L9 274 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 CD177Q8N6Q3 437 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 CCDC54Q8NEL0 328 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 TRMT10AQ8TBZ6 339 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 TRUB1Q8WWH5 349 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 RORBQ92753 470 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 EME1Q96AY2 570 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 HRASLS5Q96KN8 279 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 NRIP2Q9BQI9 281 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ADI1Q9BV57 179 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 SLITRK2Q9H156 845 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 DPAGT1Q9H3H5 408 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF696Q9H7X3 374 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 METTL8Q9H825 291 aaKnown RBP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 BEX1Q9HBH7 125 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 USE1Q9NZ43 259 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 C1RLQ9NZP8 487 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNRD1Q9P1U0 126 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 GNG8Q9UK08 70 aa6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGXB4-207ENST00000498212 SLC7A11Q9UPY5 501 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms