RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 MRIQ9BWK5 157 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 MRPS26Q9BYN8 205 aaKnown RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CENPHQ9H3R5 247 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 SRMSQ9H3Y6 488 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 ISG20L2Q9H9L3 353 aaKnown RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 PAQR5Q9NXK6 330 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 CLCF1Q9UBD9 225 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 KLHL21Q9UJP4 597 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF337Q9Y3M9 751 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 MRPS18BQ9Y676 258 aaKnown RBP4.7□□□□□ -1.66
BRCA1-224ENST00000497488 MYH15Q9Y2K3 1946 aa4.7□□□□□ -1.66
BRCA1-224ENST00000497488 MYO5AQ9Y4I1 1855 aaKnown RBP4.69□□□□□ -1.66
BRCA1-224ENST00000497488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.69□□□□□ -1.66
BRCA1-224ENST00000497488 A0A1B0GUV1 79 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 A0A1W2PRG6 482 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 F5H5T6 163 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 RLN2P04090 185 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 TCRBP04435 133 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 EIF4EP06730 217 aaKnown RBP4.69□□□□□ -1.66
BRCA1-224ENST00000497488 OR5H8P0DN80 308 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 FMO3P31513 532 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 HSPA13P48723 471 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 GNG10P50151 68 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 DLX6P56179 175 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 RAB38P57729 211 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 RAB14P61106 215 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 DYNLL1P63167 89 aaKnown RBP4.69□□□□□ -1.66
BRCA1-224ENST00000497488 FCHO2Q0JRZ9 810 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 LY6DQ14210 128 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF266Q14584 549 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 PDK2Q15119 407 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 TFDP3Q5H9I0 405 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 OR2B11Q5JQS5 317 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 BAIAP2L2Q6UXY1 529 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 GAPTQ8N292 157 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 CSNK1G2-AS1Q8NCQ2 148 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 OR5B17Q8NGF7 314 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 OR6T1Q8NGN1 323 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 NPRL2Q8WTW4 380 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 FAM151AQ8WW52 585 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 BTN2A3PQ96KV6 586 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 ZNF597Q96LX8 424 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 KCTD7Q96MP8 289 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 STACQ99469 402 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 WACQ9BTA9 647 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 SH2D2AQ9NP31 389 aa4.69□□□□□ -1.66
BRCA1-224ENST00000497488 MN1Q10571 1320 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-224ENST00000497488 RLFQ13129 1914 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 MYH2Q9UKX2 1941 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 SIPA1L1O43166 1804 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 DOCK2Q92608 1830 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 A0A087X002 238 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 C21orf140B9A014 251 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 H3BNH8 94 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 ACOX3O15254 700 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 DENRO43583 198 aaKnown RBP4.68□□□□□ -1.66
BRCA1-224ENST00000497488 CD74P04233 296 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 CALB1P05937 261 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 GKN3PP0CG01 181 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 CD38P28907 300 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 ACVRL1P37023 503 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 MYCNOSP40205 109 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 LINC00205P59089 165 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 FZD2Q14332 565 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 TMED2Q15363 201 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 TTLL9Q3SXZ7 439 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 ACSM3Q53FZ2 586 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 FKBP1CQ5VVH2 108 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 AKAP14Q86UN6 197 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 NKAPP1Q8N9T2 125 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 Q8NBF4 154 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 ACBD4Q8NC06 268 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 CCDC54Q8NEL0 328 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 OR10J6PQ8NGY7 276 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 OR51Q1Q8NH59 317 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 ZFP90Q8TF47 636 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 DGCR14Q96DF8 476 aaKnown RBP4.68□□□□□ -1.66
BRCA1-224ENST00000497488 MRAP2Q96G30 205 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 NODALQ96S42 347 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 YTHDF1Q9BYJ9 559 aaKnown RBP4.68□□□□□ -1.66
BRCA1-224ENST00000497488 BOLA2Q9H3K6 86 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 MRPL40Q9NQ50 206 aaKnown RBP4.68□□□□□ -1.66
BRCA1-224ENST00000497488 SLC7A11Q9UPY5 501 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 MYRFQ9Y2G1 1151 aa4.68□□□□□ -1.66
BRCA1-224ENST00000497488 TRIP12Q14669 1992 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-224ENST00000497488 DDX60LQ5H9U9 1706 aaKnown RBP4.67□□□□□ -1.66
BRCA1-224ENST00000497488 TINCRA0A1B0GVN0 87 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 PRR23AA6NEV1 266 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SYCE1LA8MT33 242 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 A8MXK9 166 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 E5RI56 91 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 LINC01619G3V211 115 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 H3BQV1 296 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 CXCR6O00574 342 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 PFDN6O15212 129 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SSNA1O43805 119 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 ISG15P05161 165 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 SLC2A1P11166 492 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 F8A1P23610 371 aa4.67□□□□□ -1.66
BRCA1-224ENST00000497488 AP2S1P53680 142 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms