RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 LPAR5Q9H1C0 372 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 NKX2-4Q9H2Z4 354 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 PARLQ9H300 379 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 PRR13Q9NZ81 148 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 LHX3Q9UBR4 397 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 HSD17B6O14756 317 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 GNB3P16520 340 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 ARR3P36575 388 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 RAB38P57729 211 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 MLF1P58340 268 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 TAS2R30P59541 319 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 SRPXP78539 464 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 ZNF90Q03938 601 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 RAB35Q15286 201 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 ALG10Q5BKT4 473 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 MRPL2Q5T653 305 aaKnown RBP7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 C12orf54Q6X4T0 127 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 RPS4Y2Q8TD47 263 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 ZNF480Q8WV37 535 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 APOBEC4Q8WW27 367 aaKnown RBP7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 AQP3Q92482 292 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 FGGYQ96C11 551 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 KCNK15Q9H427 330 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 CUTCQ9NTM9 273 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 KLK13Q9UKR3 277 aa7.29□□□□□ -1.24
CRNKL1-205ENST00000496549 A0A1B0GU03 582 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 ADM5C9JUS6 153 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 APODP05090 189 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 ATP6V0CP27449 155 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 FXYD4P59646 89 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 AGERQ15109 404 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 THSD4Q6ZMP0 1018 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 POC1AQ8NBT0 407 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR5B3Q8NH48 314 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR2AE1Q8NHA4 323 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 LHX4Q969G2 390 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 TMEM186Q96B77 213 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 LOXL4Q96JB6 756 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PLEKHF2Q9H8W4 249 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PPIL1Q9Y3C6 166 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 SCN1AP35498 2009 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 BCL2P10415 239 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 USF1P22415 310 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 HOXA11P31270 313 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PTGER1P34995 402 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 THBS3P49746 956 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 EFNA3P52797 238 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 SLC8B1Q6J4K2 584 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 CPEB2Q7Z5Q1 589 aaKnown RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 LINC01551Q86U37 167 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR10S1Q8NGN2 331 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 KCNG3Q8TAE7 436 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 IGSF21Q96ID5 467 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 IMMP2LQ96T52 175 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 TMEM59Q9BXS4 323 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 RCL1Q9Y2P8 373 aaKnown RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 SERTM2A0A1B0GWG4 89 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 SDCBPO00560 298 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 NRASP01111 189 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 KRASP01116 189 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 CYC1P08574 325 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 ADH5P11766 374 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 CEBPDP49716 269 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 FBXW4P57775 412 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PMCHL1Q16048 86 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 TMEM225Q6GV28 225 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 ZNF765Q7L2R6 523 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 LYG1Q8N1E2 194 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR2C3Q8N628 320 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 C12orf76Q8N812 135 aaPredicted RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR4F5Q8NH21 305 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PPP1R14AQ96A00 147 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 OR4F4Q96R69 305 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 HDAC8Q9BY41 377 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 GPR84Q9NQS5 396 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 PEF1Q9UBV8 284 aaKnown RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 ST3GAL6Q9Y274 331 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 SSC5DA1L4H1 1573 aa7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 MKI67P46013 3256 aaKnown RBP7.28□□□□□ -1.24
CRNKL1-205ENST00000496549 J3QRE1 110 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 LATO43561 262 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 ZNF708P17019 499 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 GLRA1P23415 457 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 MC5RP33032 325 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 SNU13P55769 128 aaKnown RBP7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 BAXQ07812 192 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 ZNF154Q13106 437 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 PLPPR5Q32ZL2 321 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 HOGA1Q86XE5 327 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 OR51T1Q8NGJ9 327 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 OR5D14Q8NGL3 314 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 SLC25A43Q8WUT9 341 aaPredicted RBP7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 MANBALQ9NQG1 85 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 LTBP3Q9NS15 1303 aa7.27□□□□□ -1.24
CRNKL1-205ENST00000496549 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
CRNKL1-205ENST00000496549 BRCA1P38398 1863 aaKnown RBP7.27□□□□□ -1.25
CRNKL1-205ENST00000496549 SMIM35A0A1B0GVV1 85 aa7.27□□□□□ -1.25
CRNKL1-205ENST00000496549 FAM221AA4D161 298 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms