RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF679Q8IYX0 411 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 ZNF561Q8N587 486 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 C11orf42Q8N5U0 333 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 OR2T6Q8NHC8 308 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 CFHR4Q92496 578 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 ZNF488Q96MN9 340 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 OR8B4Q96RC9 309 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 COPS3Q9UNS2 423 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 FOXJ3Q9UPW0 622 aa17.94■□□□□ 0.46
HDDC3-203ENST00000494993 SLC1A7O00341 560 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 DHRS3O75911 302 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 NRASP01111 189 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 PGA5P0DJD9 388 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 HOXB6P17509 224 aaKnown RBP17.93■□□□□ 0.46
HDDC3-203ENST00000494993 RIDAP52758 137 aaKnown RBP17.93■□□□□ 0.46
HDDC3-203ENST00000494993 SNAPC1Q16533 368 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 ZNF684Q5T5D7 378 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 LCN1P1Q5VSP4 162 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 TMEM200BQ69YZ2 307 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 KLHDC1Q8N7A1 406 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 ASB17Q8WXJ9 295 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 PPP1R14AQ96A00 147 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 TTTY10Q9BZA0 68 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 C1orf21Q9H246 121 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 TVP23BQ9NYZ1 205 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 TMEM14AQ9Y6G1 99 aa17.93■□□□□ 0.46
HDDC3-203ENST00000494993 G3V4G9 280 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 J3QT63 122 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 SYNGR1O43759 233 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 TTRP02766 147 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 OPN1MWP04001 364 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 OPN1MW2P0DN77 364 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 OPN1MW3P0DN78 364 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 PRDX2P32119 198 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 HAAOP46952 286 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 CEBPDP49716 269 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-203ENST00000494993 BMXP51813 675 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 MFGE8Q08431 387 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-203ENST00000494993 BEAN1Q3B7T3 259 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 HIST2H2BDQ6DRA6 164 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 LIAT1Q6ZQX7 453 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 C11orf44Q8N8P7 122 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 THTPAQ9BU02 230 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 USE1Q9NZ43 259 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 IKZF2Q9UKS7 526 aa17.92■□□□□ 0.46
HDDC3-203ENST00000494993 hCG_1809904A0A1W2PP81 198 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 A0A1W2PPE2 198 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 A0A1W2PR64 198 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 A0A1W2PRV1 198 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 CHST1O43916 411 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 NOS1APO75052 506 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-203ENST00000494993 CCL3L1P16619 93 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 COX7A1P24310 79 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 ZNF573Q86YE8 665 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 OR4M1Q8NGD0 313 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 OR2T27Q8NH04 317 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 PIFOQ8TCI5 191 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 NPFFR1Q9GZQ6 430 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 POLDIP2Q9Y2S7 368 aa17.91■□□□□ 0.46
HDDC3-203ENST00000494993 MEGF11A6BM72 1044 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 SRSF10O75494 262 aaKnown RBP17.9■□□□□ 0.46
HDDC3-203ENST00000494993 NXPH2O95156 264 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 LGALS4P56470 323 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 ERVFRD-1P60508 538 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 ZNF273Q14593 569 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 CLVS2Q5SYC1 327 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 TMEM42Q69YG0 159 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 DTX3Q8N9I9 347 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 NRIP2Q9BQI9 281 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 MOB1AQ9H8S9 216 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 GPR173Q9NS66 373 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 NOTCH3Q9UM47 2321 aa17.9■□□□□ 0.46
HDDC3-203ENST00000494993 PQLC2LA1A4F0 135 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 CRISP1P54107 249 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 CBX1P83916 185 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 KPRPQ5T749 579 aaPredicted RBP17.89■□□□□ 0.45
HDDC3-203ENST00000494993 SAMD5Q5TGI4 173 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 CCDC197Q8NCU1 140 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 DNAJC9Q8WXX5 260 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 CNN2Q99439 309 aaKnown RBP17.89■□□□□ 0.45
HDDC3-203ENST00000494993 HES4Q9HCC6 221 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 DNAJB9Q9UBS3 223 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 OR14J1Q9UGF5 321 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 GTF2A1LQ9UNN4 478 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 V9GYS6 101 aa17.89■□□□□ 0.45
HDDC3-203ENST00000494993 LOC110117498-PIK3R3F6TDL0 507 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 DLGAP1O14490 977 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 FKBP6O75344 327 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 TK1P04183 234 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 VSIG10L2P0DP72 767 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 MPZP25189 248 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 ZNF782Q6ZMW2 699 aaPredicted RBP17.88■□□□□ 0.45
HDDC3-203ENST00000494993 ASRGL1Q7L266 308 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 LHFPL4Q7Z7J7 247 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 CALHM1Q8IU99 346 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 BATF2Q8N1L9 274 aa17.88■□□□□ 0.45
HDDC3-203ENST00000494993 NKX3-1Q99801 234 aaPredicted RBP17.88■□□□□ 0.45
HDDC3-203ENST00000494993 PAPOLBQ9NRJ5 636 aaKnown RBP17.88■□□□□ 0.45
HDDC3-203ENST00000494993 FAM90A8PA6NJQ4 464 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 VGLL3A8MV65 326 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms