RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PSMC5P62195 406 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 GRB2P62993 217 aaKnown RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 ST3GAL4Q11206 333 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 TOMM34Q15785 309 aaPredicted RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 TAF9Q16594 264 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 MLIPQ5VWP3 458 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 DAZ4Q86SG3 579 aaKnown RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 LINC00337Q8N6G1 96 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 LINC00469Q8N7U9 141 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 OR5T3Q8NGG3 340 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 FAM57AQ8TBR7 257 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 TCP10LQ8TDR4 215 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 TMEM159Q96B96 161 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 SPACA5Q96QH8 159 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 SHANK2-AS3Q9BTD1 123 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 FBXO44Q9H4M3 255 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 RDH14Q9HBH5 336 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 FAM60AQ9NP50 221 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 RPRD1BQ9NQG5 326 aaKnown RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 DAZ1Q9NQZ3 744 aaKnown RBP1.66□□□□□ -2.14
SMC4-223ENST00000493695 CHRAC1Q9NRG0 131 aa1.66□□□□□ -2.14
SMC4-223ENST00000493695 IGKV2-24A0A0C4DH68 120 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 A0A1W2PNN7 141 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 IZUMO1RA6ND01 250 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 PLEKHA8P1O95397 391 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 PTTG1O95997 202 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 OR4Q2P0C623 313 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 OR5AC1P0C628 307 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 CPN2P22792 545 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 HLA-DMAP28067 261 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 TEAD1P28347 426 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 OR12D2P58182 307 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 SLC35B1P78383 322 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 MAPRE2Q15555 327 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 CDNFQ49AH0 187 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 MRPL2Q5T653 305 aaKnown RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 FA2HQ7L5A8 372 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 ADM2Q7Z4H4 148 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 VTCN1Q7Z7D3 282 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 SGPP2Q8IWX5 399 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 ZFP62Q8NB50 900 aaPredicted RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 FBXO36Q8NEA4 188 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 ZNF420Q8TAQ5 688 aaPredicted RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 ORAOV1Q8WV07 137 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 TSNAXQ99598 290 aaKnown RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 TM2D3Q9BRN9 247 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 TBL1XR1Q9BZK7 514 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 TRIM45Q9H8W5 580 aaPredicted RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 ZNF302Q9NR11 478 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 ZNF492Q9P255 531 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 STX18Q9P2W9 335 aaKnown RBP1.65□□□□□ -2.15
SMC4-223ENST00000493695 ZNF391Q9UJN7 358 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 RAB22AQ9UL26 194 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 ELP1O95163 1332 aa1.65□□□□□ -2.15
SMC4-223ENST00000493695 A0A0G2JMP0 313 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 A0A0J9YYE9 177 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 A0A0X1KG70 313 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 A0A1W2PPV4 95 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 GATCO43716 136 aaKnown RBP1.64□□□□□ -2.15
SMC4-223ENST00000493695 NDUFS5O43920 106 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 ETHE1O95571 254 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 TRBC1P01850 177 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 OR5AL1P0C617 328 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 GZMAP12544 262 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 HRES1P13985 223 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 P2RY2P41231 377 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 RGS6P49758 472 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 BCAP31P51572 246 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 ATP6V1FQ16864 119 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 SPIN3Q5JUX0 258 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 APOBEC3HQ6NTF7 200 aaKnown RBP1.64□□□□□ -2.15
SMC4-223ENST00000493695 SETD3Q86TU7 594 aaPredicted RBP1.64□□□□□ -2.15
SMC4-223ENST00000493695 CYB561A3Q8NBI2 242 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 ZNF555Q8NEP9 628 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 OR51L1Q8NGJ5 315 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 OR51A7Q8NH64 312 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 ZCCHC13Q8WW36 166 aaKnown RBP1.64□□□□□ -2.15
SMC4-223ENST00000493695 TNFRSF14Q92956 283 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 YIPF5Q969M3 257 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 Q96MT0 163 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 PEBP4Q96S96 227 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 BCL7BQ9BQE9 202 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 C20orf144Q9BQM9 153 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 CHID1Q9BWS9 393 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 API5Q9BZZ5 524 aaKnown RBP1.64□□□□□ -2.15
SMC4-223ENST00000493695 TAS2R1Q9NYW7 299 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 SLC7A11Q9UPY5 501 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 R4GN34 69 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 THADAQ6YHU6 1953 aa1.64□□□□□ -2.15
SMC4-223ENST00000493695 AQRO60306 1485 aaKnown RBP eCLIP1.63□□□□□ -2.151e-12■□□□□ 8.7
SMC4-223ENST00000493695 ANKRD20A5PA0PJZ0 165 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 KDELR3O43731 214 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 IGHG2P01859 326 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 HLA-GP17693 338 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 TAS2R60P59551 318 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 RPL31P62899 125 aaKnown RBP1.63□□□□□ -2.15
SMC4-223ENST00000493695 ATP5G2Q06055 141 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 ADIGQ0VDE8 80 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 TTC32Q5I0X7 151 aa1.63□□□□□ -2.15
SMC4-223ENST00000493695 CLLU1OSQ5K130 101 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms