RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 POMT1Q9Y6A1 747 aa7.25□□□□□ -1.25
HDAC3-211ENST00000491581 TET2Q6N021 2002 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-211ENST00000491581 FAM230AA0A1W2PPH8 454 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM210A6NLX4 147 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 ZAR1LA6NP61 321 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 LOC110117498-PIK3R3F6TDL0 507 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 H0YAE9 185 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 DNAJC8O75937 253 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 NRASP01111 189 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 HMGN1P05114 100 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 ANXA8P13928 327 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 CFL1P23528 166 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 DUSP1P28562 367 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 HAAOP46952 286 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 SNU13P55769 128 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 GNG3P63215 75 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 MZT1Q08AG7 82 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 UBE2V2Q15819 145 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 UTF1Q5T230 341 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 SLX4IPQ5VYV7 408 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 C12orf73Q69YU5 71 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 ZNF322Q6U7Q0 402 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 MEPCEQ7L2J0 689 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 TCF23Q7RTU1 214 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 THAP5Q7Z6K1 395 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 ZNF679Q8IYX0 411 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 PRSS35Q8N3Z0 413 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 OR10Z1Q8NGY1 313 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 PIFOQ8TCI5 191 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 C12orf43Q96C57 262 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 CNN2Q99439 309 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 CIB1Q99828 191 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 SSX3Q99909 188 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 YIPF3Q9GZM5 350 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 RGCCQ9H4X1 137 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 KRT84Q9NSB2 600 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 FAM53CQ9NYF3 392 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 NUFIP1Q9UHK0 495 aaKnown RBP7.24□□□□□ -1.25
HDAC3-211ENST00000491581 VPREB3Q9UKI3 123 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 OR52A1Q9UKL2 312 aa7.24□□□□□ -1.25
HDAC3-211ENST00000491581 VWFP04275 2813 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 A0A0U1RQV5 110 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 A0A1W2PQL4 384 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 PQLC2LA1A4F0 135 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 SAC3D1A6NKF1 404 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 MTRF1O75570 445 aaKnown RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 DHRS3O75911 302 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 CLPXO76031 633 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 APOC1P02654 83 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 FBP1P09467 338 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 PRDX2P32119 198 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 KIR3DL2P43630 455 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 RIDAP52758 137 aaKnown RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 BPIFB3P59826 476 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 ROM1Q03395 351 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 RIPPLY1Q0D2K3 151 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM95Q3KNT9 176 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TP53I3Q53FA7 332 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 BCL2L15Q5TBC7 163 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 DHRS7BQ6IAN0 325 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 CRIP3Q6Q6R5 217 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 METAP1DQ6UB28 335 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM219Q86XT9 240 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 POC1AQ8NBT0 407 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 OR10AC1Q8NH08 325 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 OR5K1Q8NHB7 308 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 SLAMF9Q96A28 289 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 HIST1H2AAQ96QV6 131 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 NKX3-1Q99801 234 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 MROQ9BYG7 248 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TCF7L1Q9HCS4 588 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 MTCH1Q9NZJ7 389 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 R4GMQ9 66 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 V9GYS6 101 aa7.23□□□□□ -1.25
HDAC3-211ENST00000491581 PRKDCP78527 4128 aaKnown RBP7.23□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 FAM172BPA6NC97 362 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 ANKRD61A6NGH8 418 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 G3V2T6 193 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 G3V4G9 280 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 MMP23AO75900 390 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 NXPH2O95156 264 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 PAHP00439 452 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 IGHA1P01876 353 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 PGA5P0DJD9 388 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 EEF1B2P24534 225 aaKnown RBP7.22□□□□□ -1.25
HDAC3-211ENST00000491581 NPBWR2P48146 333 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 UBE2E1P51965 193 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 DLX6P56179 175 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 CAV3P56539 151 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 COL10A1Q03692 680 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 ZNF85Q03923 595 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 ATP6AP1Q15904 470 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 DNAL1Q4LDG9 190 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 ZNF684Q5T5D7 378 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 KDM4DQ6B0I6 523 aa7.22□□□□□ -1.25
HDAC3-211ENST00000491581 KCTD18Q6PI47 426 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms