RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 UEVLDQ8IX04 471 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 JAGN1Q8N5M9 183 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 RNF128Q8TEB7 428 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 TXNIPQ9H3M7 391 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 FN3KRPQ9HA64 309 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 UQCC1Q9NVA1 299 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 EPG5Q9HCE0 2579 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 COL6A6A6NMZ7 2263 aa11.62□□□□□ -0.55
CHD1L-208ENST00000488864 C5orf51A6NDU8 294 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 TTLL8A6PVC2 850 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 LINC00587B1AMM8 73 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SNAPINO95295 136 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 CRHP06850 196 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ABOP16442 354 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 PSMB6P28072 239 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SERPINF1P36955 418 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 BIDP55957 195 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ADAM8P78325 824 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 RNASE10Q5GAN6 216 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 EMC4Q5J8M3 183 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 TEX30Q5JUR7 227 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 RPUSD3Q6P087 351 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 BHLHE23Q8NDY6 225 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SLC30A7Q8NEW0 376 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 OR4D6Q8NGJ1 314 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 OR10R2Q8NGX6 335 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SLC25A44Q96H78 314 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 OXGR1Q96P68 337 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF385AQ96PM9 386 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 PHB2Q99623 299 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 NAA11Q9BSU3 229 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 MRPL22Q9NWU5 206 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 A0A1W2PNV4 684 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 H0YIZ8 118 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 XKRYO14609 159 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 FARS2O95363 451 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 PTGFRP43088 359 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 EIF2B1Q14232 305 aaKnown RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SWI5Q1ZZU3 235 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 TRAPPC6BQ86SZ2 158 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF679Q8IYX0 411 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 RNF141Q8WVD5 230 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 AQP3Q92482 292 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 PRRT1Q99946 306 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SEC11CQ9BY50 192 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 CHMP1AQ9HD42 196 aaPredicted RBP11.61□□□□□ -0.55
CHD1L-208ENST00000488864 MMP26Q9NRE1 261 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 SLC2A8Q9NY64 477 aa11.61□□□□□ -0.55
CHD1L-208ENST00000488864 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 MSGN1A6NI15 193 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 PHYHO14832 338 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 CRYABP02511 175 aaKnown RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 CLDN17P56750 224 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 MEF2DQ14814 521 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 GFOD2Q3B7J2 385 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF260Q3ZCT1 412 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 SLC16A13Q7RTY0 426 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 FAM219AQ8IW50 185 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ZNF519Q8TB69 540 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 CKLFQ9UBR5 152 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 EDARQ9UNE0 448 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 HSPB2A8KAH6 182 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 IFNA4P05014 189 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 CD37P11049 281 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 SNRPEP62304 92 aaKnown RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 PJVKQ0ZLH3 352 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 HSPB2Q16082 182 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 RBMS3Q6XE24 437 aaKnown RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 ASB10Q8WXI3 467 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 PLSCR2Q9NRY7 297 aa11.6□□□□□ -0.55
CHD1L-208ENST00000488864 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
CHD1L-208ENST00000488864 COLCA2A8K830 154 aa11.59□□□□□ -0.55
CHD1L-208ENST00000488864 AQP7O14520 342 aa11.59□□□□□ -0.55
CHD1L-208ENST00000488864 NTF4P34130 210 aa11.59□□□□□ -0.55
CHD1L-208ENST00000488864 HRH1P35367 487 aa11.59□□□□□ -0.55
CHD1L-208ENST00000488864 DAP3P51398 398 aaKnown RBP11.59□□□□□ -0.55
CHD1L-208ENST00000488864 FMODQ06828 376 aa11.59□□□□□ -0.55
CHD1L-208ENST00000488864 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms