RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZNF649Q9BS31 505 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 IER2Q9BTL4 223 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 TUSC2O75896 110 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 RD3LP0DJH9 198 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 OR2B11Q5JQS5 317 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 KRBOX4Q5JUW0 171 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 LHFPL2Q6ZUX7 228 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 WDR1O75083 606 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 IFNA5P01569 189 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 CA6P23280 308 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 LSM6P62312 80 aaKnown RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ZDHHC23Q8IYP9 409 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 FAM181AQ8N9Y4 354 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 PXT1Q8NFP0 134 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 POC1BQ8TC44 478 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 GPX8Q8TED1 209 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 SCARB1Q8WTV0 552 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF524Q96C55 264 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ESRP2Q9H6T0 727 aaKnown RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 TRBV5-7A0A0A0MS05 114 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 A0A0G2JMM0 328 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 A0A1W2PPB8 328 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 A0A1W2PRS3 328 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 KIR3DP1A8MWS1 328 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 CLPSP04118 112 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 PMP22Q01453 160 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 MUCL1Q96DR8 90 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 ANGPTL4Q9BY76 406 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 CHCHD2Q9Y6H1 151 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-216ENST00000486741 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
HMGN1-216ENST00000486741 C2orf16Q68DN1 1984 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 TTLL8A6PVC2 850 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 CD300LBA8K4G0 201 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM127O75204 238 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM128Q5BJH2 165 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF837Q96EG3 531 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-216ENST00000486741 IP6K3Q96PC2 410 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 C12orf57Q99622 126 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM231Q9H6L2 316 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 G6PC2Q9NQR9 355 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 BIN3Q9NQY0 253 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 KCNK7Q9Y2U2 307 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 RBM39Q14498 530 aaKnown RBP11.62□□□□□ -0.55
HMGN1-216ENST00000486741 HLXQ14774 488 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-216ENST00000486741 GPR157Q5UAW9 335 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 DCAF12L2Q5VW00 463 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 OR2M7Q8NG81 312 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 OR11H4Q8NGC9 324 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 ST7LQ8TDW4 575 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 SPIN2AQ99865 258 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 SPIN2BQ9BPZ2 258 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 SRXN1Q9BYN0 137 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 SOX8P57073 446 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 ACOT7LQ6ZUV0 252 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 LILRB2Q8N423 598 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 ZADH2Q8N4Q0 377 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
HMGN1-216ENST00000486741 GEMIN2O14893 280 aaKnown RBP11.61□□□□□ -0.55
HMGN1-216ENST00000486741 CBR1P16152 277 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 FUT6P51993 359 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 TFAP2EQ6VUC0 442 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
HMGN1-216ENST00000486741 DEFB108BQ8NET1 73 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 OR13C8Q8NGS7 320 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 RGCCQ9H4X1 137 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 FOXJ2Q9P0K8 574 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 UNC80Q8N2C7 3258 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 PRSS44E7EML9 344 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 MICBQ29980 383 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 PIGYQ3MUY2 71 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 HIKESHIQ53FT3 197 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 TMEM200AQ86VY9 491 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 EXTL1Q92935 676 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 CNTNAP3BQ96NU0 1288 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 PMS2P1A4D2B8 440 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 EFNA2O43921 213 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 LRP3O75074 770 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 CD1AP06126 327 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 UMODP07911 640 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 ARR3P36575 388 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 ASCL1P50553 236 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 EDDM3BP56851 147 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 SCAND1P57086 179 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 EIF3IQ13347 325 aaKnown RBP11.61□□□□□ -0.55
HMGN1-216ENST00000486741 LPCAT3Q6P1A2 487 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 SLC25A47Q6Q0C1 308 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 OR6K3Q8NGY3 331 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 SPSB1Q96BD6 273 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 MS4A3Q96HJ5 214 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
HMGN1-216ENST00000486741 SLC7A10Q9NS82 523 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms