RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HCRTR2O43614 444 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF20P17024 532 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 FZD2Q14332 565 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 SLC10A1Q14973 349 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 C2orf27AQ580R0 203 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 SLC35E3Q7Z769 313 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 OR1E3Q8WZA6 343 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 CCDC3Q9BQI4 270 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 SNHG12Q9BXW3 62 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 GPR87Q9BY21 358 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF700Q9H0M5 742 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 PHF3Q92576 2039 aaKnown RBP9.35□□□□□ -0.91
CCDC171-208ENST00000486641 A6NIZ1 184 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 SLC31A1O15431 190 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 SOX15O60248 233 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 IL33O95760 270 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 NUDT14O95848 222 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 MT-ATP6P00846 226 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 HPNP05981 417 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ATP6V0CP27449 155 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PPM1FP49593 454 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 RAP1BP61224 184 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PPP1CAP62136 330 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 RPS21P63220 83 aaKnown RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PSRC1Q6PGN9 363 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 KLHL24Q6TFL4 600 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PRR22Q8IZ63 422 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF321PQ8N8H1 164 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 SLAMF6Q96DU3 332 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ADOQ96SZ5 270 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 URM1Q9BTM9 101 aaKnown RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PECRQ9BY49 303 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PRTFDC1Q9NRG1 225 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF701Q9NV72 531 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 AK3Q9UIJ7 227 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PADI1Q9ULC6 663 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 MMACHCQ9Y4U1 282 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 MARCH11A6NNE9 402 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 DHRS7CA6NNS2 312 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 IGHMP01871 453 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 HSPB1P04792 205 aaKnown RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 DBHP09172 617 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 OR5AC1P0C628 307 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 GLI4P10075 376 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PNLIPP16233 465 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF25P17030 456 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 IL11P20809 199 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 BLVRBP30043 206 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PIGPP57054 158 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 IL13RA2Q14627 380 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 TMEM187Q14656 261 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF506Q5JVG8 444 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 C1QL2Q7Z5L3 287 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 FAM89BQ8N5H3 189 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 TSACCQ96A04 125 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 GPER1Q99527 375 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 VN1R1Q9GZP7 353 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 FAM60AQ9NP50 221 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 THAP10Q9P2Z0 257 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-208ENST00000486641 PIAS3Q9Y6X2 628 aa9.34□□□□□ -0.91
CCDC171-208ENST00000486641 FOXI3A8MTJ6 420 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 MBP02144 154 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 ANOS1P23352 680 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 IGLV3-21P80748 117 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 TSPO2Q5TGU0 170 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 FBXW12Q6X9E4 464 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 OR14C36Q8NHC7 312 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 STT3BQ8TCJ2 826 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 NXF5Q9H1B4 397 aaKnown RBP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 LIME1Q9H400 295 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 HSF4Q9ULV5 492 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 FAM24AA6NFZ4 105 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 B4DEV8 164 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 ST8SIA3O43173 380 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 ZNF205O95201 554 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 CSNK1A1P48729 337 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 RND2P52198 227 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 GPM6BQ13491 265 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 NKAIN1Q4KMZ8 207 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 COL13A1Q5TAT6 717 aaPredicted RBP9.33□□□□□ -0.92
CCDC171-208ENST00000486641 CNKSR3Q6P9H4 555 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 P4HA3Q7Z4N8 544 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 OR8G5Q8NG78 346 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 OR5D18Q8NGL1 313 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 CLDND2Q8NHS1 167 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 PATE1Q8WXA2 126 aa9.33□□□□□ -0.92
CCDC171-208ENST00000486641 CDH20Q9HBT6 801 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms