RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ATP23Q9Y6H3 246 aa12.29□□□□□ -0.44
COL9A1-207ENST00000486080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.28□□□□□ -0.44
COL9A1-207ENST00000486080 A0A1W2PQ09 198 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 F5H5P2 479 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 RAB27BO00194 218 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 SIAH2O43255 324 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 SYNGR1O43759 233 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 LANCL1O43813 399 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 HTR3BO95264 441 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 SFTPBP07988 381 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 MGMTP16455 207 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 NPBWR2P48146 333 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 VEGFCP49767 419 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 HAGHLQ6PII5 290 aaPredicted RBP12.28□□□□□ -0.44
COL9A1-207ENST00000486080 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
COL9A1-207ENST00000486080 SLAMF9Q96A28 289 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 CYYR1Q96J86 154 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 CST11Q9H112 138 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
COL9A1-207ENST00000486080 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
COL9A1-207ENST00000486080 IGLV3-9A0A075B6K5 115 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 METTL21EPA6NDL7 271 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 SHISA9B4DS77 424 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 AGAP20933 346 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 RPS27AP62979 156 aaKnown RBP12.27□□□□□ -0.44
COL9A1-207ENST00000486080 PITPNAQ00169 270 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 ZNF808Q8N4W9 903 aaPredicted RBP12.27□□□□□ -0.44
COL9A1-207ENST00000486080 PXT1Q8NFP0 134 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 NEUROG1Q92886 237 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 AUNIPQ9H7T9 357 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 ZMAT3Q9HA38 289 aaKnown RBP12.27□□□□□ -0.44
COL9A1-207ENST00000486080 MTCH1Q9NZJ7 389 aa12.27□□□□□ -0.44
COL9A1-207ENST00000486080 LINC00854A0A1B0GVQ3 168 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 MEIOCA2RUB1 952 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 ZSCAN5BA6NJL1 495 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 C3orf80F5H4A9 247 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 F8VVB4 439 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 F8VWA3 439 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 PYCARD-AS1I3L0S3 204 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 SOCS1O15524 211 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 RHBDL1O75783 438 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 CD3GP09693 182 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 BCL3P20749 454 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 MNDAP41218 407 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 RANBP1P43487 201 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 ADIPOQQ15848 244 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 FAM76BQ5HYJ3 339 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 ZNF573Q86YE8 665 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 ZSCAN4Q8NAM6 433 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-207ENST00000486080 OR51T1Q8NGJ9 327 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 OR13G1Q8NGZ3 307 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 MRPL24Q96A35 216 aaKnown RBP12.27□□□□□ -0.45
COL9A1-207ENST00000486080 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 THAP7Q9BT49 309 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-207ENST00000486080 TAAR3PQ9P1P4 343 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 ELF5Q9UKW6 265 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-207ENST00000486080 NOP16Q9Y3C1 178 aaKnown RBP12.27□□□□□ -0.45
COL9A1-207ENST00000486080 MYO18BQ8IUG5 2567 aa12.27□□□□□ -0.45
COL9A1-207ENST00000486080 A0A1B0GWJ7 208 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 PLAUP00749 431 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 CSTBP04080 98 aaKnown RBP12.26□□□□□ -0.45
COL9A1-207ENST00000486080 GRPP07492 148 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 OR4A8P0C604 315 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 MAB21L1Q13394 359 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 CDH24Q86UP0 819 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 SCCPDHQ8NBX0 429 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 CHST4Q8NCG5 386 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 OR2Z1Q8NG97 314 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 OR52I2Q8NH67 350 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 YIPF5Q969M3 257 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 ZNF488Q96MN9 340 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 SLC22A4Q9H015 551 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
COL9A1-207ENST00000486080 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 E7EQL1 145 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 CTDSPLO15194 276 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 CD3EP07766 207 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 GTF2F2P13984 249 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 ZNF154Q13106 437 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 TRIQKQ629K1 86 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 SAXO1Q8IYX7 474 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 FBXL14Q8N1E6 418 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 FAM89BQ8N5H3 189 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 SMIM4Q8WVI0 70 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 AQP3Q92482 292 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 TRIM63Q969Q1 353 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 Q96M66 194 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 URM1Q9BTM9 101 aaKnown RBP12.25□□□□□ -0.45
COL9A1-207ENST00000486080 CXXC4Q9H2H0 198 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 OCEL1Q9H607 264 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 ZNF442Q9H7R0 627 aa12.25□□□□□ -0.45
COL9A1-207ENST00000486080 RBFOX1Q9NWB1 397 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms