RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 A0A0U1RQV5 110 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ACOD1A6NK06 481 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 RFPL4AA6NLU0 287 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 RFPL4AL1F8VTS6 287 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 G3V2T6 193 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 J3QT63 122 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 SIGLEC5O15389 551 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 RHBDL1O75783 438 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 GATBO75879 557 aaKnown RBP5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DHRS3O75911 302 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DNAJC8O75937 253 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-205ENST00000480127 LHBP01229 141 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 PRB2P02812 416 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ACAA1P09110 424 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-205ENST00000480127 VSIG10L2P0DP72 767 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 MMP9P14780 707 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF20P17024 532 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ACKR3P25106 362 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 UBE2E1P51965 193 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 CRISP1P54107 249 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DLX1P56177 255 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ERVFRD-1P60508 538 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 ACSM1Q08AH1 577 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 EDDM3AQ14507 147 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 FAM189A2Q15884 450 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DGUOKQ16854 277 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 CLVS2Q5SYC1 327 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 SAMD5Q5TGI4 173 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DEGS2Q6QHC5 323 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 Q6ZSV7 163 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 GDPD3Q7L5L3 318 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 WDR86Q86TI4 376 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 LDLRAD3Q86YD5 345 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 GID4Q8IVV7 300 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 SLC35F2Q8IXU6 374 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 PNKDQ8N490 385 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 C11orf44Q8N8P7 122 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 OR10H4Q8NGA5 316 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 OR5A2Q8NGI9 324 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 OR2T27Q8NH04 317 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 GAFA1Q96PS6 74 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 IL4I1Q96RQ9 567 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 DDOQ99489 341 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 TEAD3Q99594 435 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 SSX3Q99909 188 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 APOL4Q9BPW4 351 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 NPFFR1Q9GZQ6 430 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 RIBC2Q9H4K1 309 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 PPP1R3EQ9H7J1 279 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 NEK6Q9HC98 313 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 RASL12Q9NYN1 266 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 KLHDC2Q9Y2U9 406 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 PCDHGB5Q9Y5G0 923 aa5.81□□□□□ -1.48
COL17A1-205ENST00000480127 A6NIN4 97 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 RNASEK-C17orf49H0YIS7 233 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 M0R129 80 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 F2RL2O00254 374 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 PIN1P1O15428 100 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 SYT7O43581 403 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ARG1P05089 322 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 PSG2P11465 335 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 FCGR1AP12314 374 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ALOX5APP20292 161 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ANOS1P23352 680 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 GABRR1P24046 479 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 FASP25445 335 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 PRDX2P32119 198 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ARHGDIBP52566 201 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 SNU13P55769 128 aaKnown RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 CAV3P56539 151 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 OR12D2P58182 307 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 LRRC75BQ2VPJ9 315 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ATPAF1Q5TC12 328 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZBTB37Q5TC79 503 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 SLX4IPQ5VYV7 408 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF782Q6ZMW2 699 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF788Q6ZQV5 615 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 PLEKHG7Q6ZR37 379 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 MEPCEQ7L2J0 689 aaKnown RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 TMEM179BQ7Z7N9 219 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 C11orf53Q8IXP5 236 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF561Q8N587 486 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 TCEANCQ8N8B7 351 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 OR13D1Q8NGV5 346 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 OR5K1Q8NHB7 308 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ANGPTL6Q8NI99 470 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 NDNFQ8TB73 568 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 AQP3Q92482 292 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 RFKQ969G6 155 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 MRPL48Q96GC5 212 aaKnown RBP5.8□□□□□ -1.48
COL17A1-205ENST00000480127 LYZL4Q96KX0 146 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 DMRTB1Q96MA1 342 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF488Q96MN9 340 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 MNTQ99583 582 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 TLNRD1Q9H1K6 362 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 OR51I2Q9H344 312 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 C16orf95Q9H693 158 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 SLC25A19Q9HC21 320 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 CLN6Q9NWW5 311 aa5.8□□□□□ -1.48
COL17A1-205ENST00000480127 FAM206AQ9NX38 181 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms