RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TRMT61AQ96FX7 289 aaKnown RBP12.57□□□□□ -0.4
NPHP4-208ENST00000478423 NSG2Q9Y328 171 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 V9GYH0 126 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 A0A0J9YW62 118 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 TGM6O95932 706 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 ELLP55199 621 aaPredicted RBP12.57□□□□□ -0.4
NPHP4-208ENST00000478423 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
NPHP4-208ENST00000478423 GALMQ96C23 342 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 TAAR5O14804 337 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 GMDSO60547 372 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 CDC14BO60729 498 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 PDCD6O75340 191 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 SPINK2P20155 84 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 SLC6A1P30531 599 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 ARV1Q9H2C2 271 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 PLEKHA2Q9HB19 425 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 FZR1Q9UM11 496 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 DXOO77932 396 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 RPS10P46783 165 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 ZNF626Q68DY1 528 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 USB1Q9BQ65 265 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 SHARPINQ9H0F6 387 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 PIGMQ9H3S5 423 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 ZFP92A6NM28 416 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 H3BP45 60 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 CD300CQ08708 224 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 Q8IYB0 196 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 ZNF355PQ9NSJ1 428 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 SCN5AQ14524 2016 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 H2AFB1P0C5Y9 115 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 PPP1R1AQ13522 171 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 ZDHHC22Q8N966 263 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 SNRNP200O75643 2136 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 TO15178 435 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 ALX3O95076 343 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 FGF5P12034 268 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 EIF2S3LQ2VIR3 472 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
NPHP4-208ENST00000478423 OR2M7Q8NG81 312 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 NTMQ9P121 344 aa12.56□□□□□ -0.4
NPHP4-208ENST00000478423 PDCD11Q14690 1871 aaKnown RBP12.55□□□□□ -0.4
NPHP4-208ENST00000478423 GPR31O00270 319 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 TMEM182Q6ZP80 229 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-208ENST00000478423 NAA40Q86UY6 237 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 RFLNBQ8N5W9 214 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 DUSP18Q8NEJ0 188 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 ANKRD20A5PA0PJZ0 165 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 NGFP01138 241 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 FHL5Q5TD97 284 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 H3F3CQ6NXT2 135 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 PFDN5Q99471 154 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 KLHDC2Q9Y2U9 406 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 LGALS8O00214 317 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 DNPH1O43598 174 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 CNIH1O95406 144 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 ACTL6AO96019 429 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 IAPPP10997 89 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 IL11P20809 199 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 FPR2P25090 351 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 TOR2AQ5JU69 321 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 APOBEC4Q8WW27 367 aaKnown RBP12.55□□□□□ -0.4
NPHP4-208ENST00000478423 ADIPOR1Q96A54 375 aa12.55□□□□□ -0.4
NPHP4-208ENST00000478423 ANKRD34BA5PLL1 514 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 NME2P1O60361 137 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 CD80P33681 288 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 ST6GALNAC2Q9UJ37 374 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 TMEM30CPA0ZSE6 113 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 TNFRSF1AP19438 455 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 PPP1CBP62140 327 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-208ENST00000478423 SOCS1O15524 211 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 CYC1P08574 325 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 GSK3AP49840 483 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 HTD2P86397 168 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 MGAT2Q10469 447 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 ZNF79Q15937 498 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 LSM2Q9Y333 95 aaKnown RBP12.54□□□□□ -0.4
NPHP4-208ENST00000478423 IFI6P09912 130 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms