RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PTHLHP12272 177 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 RAC2P15153 192 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 GNB3P16520 340 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 ZNF14P17017 642 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 SERPINA2P20848 420 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 C4BPBP20851 252 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 CCNOP22674 350 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 RAD52P43351 418 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 GZMKP49863 264 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 TMEM50BP56557 158 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 PER3P56645 1201 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 GNG3P63215 75 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 CD83Q01151 205 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 MZT1Q08AG7 82 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 CBX3Q13185 183 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 SURF2Q15527 256 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 GRK1Q15835 563 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 SRSF7Q16629 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
VMA21-203ENST00000477649 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 MPV17LQ2QL34 196 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 C1orf185Q5T7R7 199 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 C9orf135Q5VTT2 229 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 LPCAT3Q6P1A2 487 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 C11orf88Q6PI97 169 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 CRIP3Q6Q6R5 217 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 IDO2Q6ZQW0 420 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 MDP1Q86V88 176 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 Q8IYB0 196 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 RBMXL3Q8N7X1 1067 aaKnown RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 CNEP1R1Q8N9A8 125 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 C9orf106Q8NAJ2 232 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 OR56B2PQ8NGI1 322 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 OR4K15Q8NH41 348 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 DACT3Q96B18 629 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 WBP1Q96G27 269 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 ZNF486Q96H40 463 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 ZNF75AQ96N20 296 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 SPACA5Q96QH8 159 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 DHRS9Q9BPW9 319 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 SFXN3Q9BWM7 321 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 PAPOLGQ9BWT3 736 aaKnown RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 PECRQ9BY49 303 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 BCL2L14Q9BZR8 327 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 PKIBQ9C010 78 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 TP63Q9H3D4 680 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 BANF2Q9H503 90 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 RANGRFQ9HD47 186 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 PLEKHJ1Q9NW61 149 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 NKIRAS2Q9NYR9 191 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 MYEF2Q9P2K5 600 aaKnown RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 NPTNQ9Y639 398 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 MED12Q93074 2177 aa6.85□□□□□ -1.31
VMA21-203ENST00000477649 NCOA6Q14686 2063 aaPredicted RBP6.85□□□□□ -1.31
VMA21-203ENST00000477649 EPG5Q9HCE0 2579 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 A0A0A6YYD4 124 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 TMEM82A0PJX8 343 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 ZNF850A8MQ14 1090 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PYCARD-AS1I3L0S3 204 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 SOCS1O15524 211 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PDCD6O75340 191 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 RGS11O94810 467 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 HTR3BO95264 441 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 CGAP01215 116 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 RLN1P04808 185 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 ACAA1P09110 424 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 GIPP09681 153 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 ZNF735P0CB33 412 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 ANOS1P23352 680 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 OR3A3P47888 321 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 FOXG1P55316 489 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 TMPRSS3P57727 454 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 RAP2BP61225 183 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 CXADRP78310 365 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 CD300CQ08708 224 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PRDX4Q13162 271 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 FCN2Q15485 313 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 KCNJ8Q15842 424 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 HIKESHIQ53FT3 197 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 TMEM255AQ5JRV8 349 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PLAC9Q5JTB6 97 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 ZNF324BQ6AW86 544 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 ZNF585AQ6P3V2 769 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 SLC36A1Q7Z2H8 476 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 SPERTQ8NA61 448 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 OR5H2Q8NGV7 314 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 OR8S1Q8NH09 359 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 OR51F2Q8NH61 342 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 TERB2Q8NHR7 220 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 ZNF431Q8TF32 576 aaPredicted RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 NPRL2Q8WTW4 380 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
VMA21-203ENST00000477649 ARHGAP5-AS1Q96IT6 56 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 MICU1Q9BPX6 476 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 SCNM1Q9BWG6 230 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 GON7Q9BXV9 100 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 PIGMQ9H3S5 423 aa6.84□□□□□ -1.31
VMA21-203ENST00000477649 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms