RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PFDN1O60925 122 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 HTR3BO95264 441 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CRYAAP02489 173 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 TUBG1P23258 451 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CHRNB4P30926 498 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 ASCL1P50553 236 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
COL4A6-206ENST00000477085 RSU1Q15404 277 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 RAB12Q6IQ22 244 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 OR8G5Q8NG78 346 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 OR51T1Q8NGJ9 327 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CPNE2Q96FN4 548 aaPredicted RBP12.33□□□□□ -0.44
COL4A6-206ENST00000477085 S100A13Q99584 98 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 CST11Q9H112 138 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 IL36GQ9NZH8 169 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
COL4A6-206ENST00000477085 H7C417 338 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 FCER2P06734 321 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 CHRM2P08172 466 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 MELTFP08582 738 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 PRSS3P35030 304 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 UQCRFS1P47985 274 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 MRPS10P82664 201 aaKnown RBP12.32□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 FBXL19-AS1Q494R0 122 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 FAM76BQ5HYJ3 339 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 HACD4Q5VWC8 232 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 SIGIRRQ6IA17 410 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 UNQ6126/PRO20091Q6UXV3 157 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 Q6ZTK2 550 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
COL4A6-206ENST00000477085 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 C15orf40Q8WUR7 153 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 TMEM171Q8WVE6 324 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 SLAMF9Q96A28 289 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 Q96M66 194 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 HIST1H2AAQ96QV6 131 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 NUDT16L1Q9BRJ7 211 aaKnown RBP12.32□□□□□ -0.44
COL4A6-206ENST00000477085 MTFP1Q9UDX5 166 aa12.32□□□□□ -0.44
COL4A6-206ENST00000477085 ANKRD20A5PA0PJZ0 165 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 SSX5O60225 188 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF250P15622 560 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 SELEP16581 610 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 BCL3P20749 454 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 INPP1P49441 399 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 GNG3P63215 75 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 PIGYQ3MUY2 71 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 HAGHLQ6PII5 290 aaPredicted RBP12.31□□□□□ -0.44
COL4A6-206ENST00000477085 CELF2-AS1Q8N7Q2 184 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 Q8NFD4 153 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 GTF3AQ92664 365 aaKnown RBP12.31□□□□□ -0.44
COL4A6-206ENST00000477085 ARHGAP5-AS1Q96IT6 56 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
COL4A6-206ENST00000477085 SLC22A4Q9H015 551 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 MMP28Q9H239 520 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 MSL2Q9HCI7 577 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
COL4A6-206ENST00000477085 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
COL4A6-206ENST00000477085 IGHV3-64DA0A0J9YX35 117 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 OR5B21A6NL26 309 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RHBDL1O75783 438 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 GTF2F2P13984 249 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 GLRXP35754 106 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RANBP1P43487 201 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RGS7BPQ6MZT1 257 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 OR10AD1Q8NGE0 317 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 PPP1R14BQ96C90 147 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 ZNF488Q96MN9 340 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 ADAT1Q9BUB4 502 aaKnown RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 NBASA2RRP1 2371 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 MFNGO00587 321 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RBBP9O75884 186 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 MT-ND4P03905 459 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 CSTBP04080 98 aaKnown RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 HIST1H1DP16402 221 aaKnown RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 GNLYP22749 145 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 GABRR1P24046 479 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 SLC6A1P30531 599 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 GCH1P30793 250 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
COL4A6-206ENST00000477085 BSPH1Q075Z2 132 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 PDCD1Q15116 288 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 TAF9Q16594 264 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 VHLLQ6RSH7 139 aa12.3□□□□□ -0.44
COL4A6-206ENST00000477085 TMEM200AQ86VY9 491 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms