RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DCAF13Q9NV06 445 aaKnown RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 RBP4P02753 201 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 TK1P04183 234 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 SEMG1P04279 462 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 IGHV1-8P0DP01 117 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 THBS3P49746 956 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 DYNC1I2Q13409 638 aaKnown RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 CRMP1Q14194 572 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 CEACAM21Q3KPI0 293 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 ABCA11PQ4W5N1 156 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 MINOS1Q5TGZ0 78 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 RPL13AP3Q6NVV1 102 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 HAGHLQ6PII5 290 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 UNQ9370/PRO34162Q6UXP9 181 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 C16orf82Q7Z2V1 217 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 POC1AQ8NBT0 407 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 OR51D1Q8NGF3 324 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 OR8D4Q8NGM9 314 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 OR6N2Q8NGY6 317 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 MUC7Q8TAX7 377 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF488Q96MN9 340 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 OR8B4Q96RC9 309 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 HOPXQ9BPY8 73 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 GAR1Q9NY12 217 aaKnown RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 IL20Q9NYY1 176 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 ZMAT5Q9UDW3 170 aaKnown RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 SAMD4AQ9UPU9 718 aaKnown RBP9.05□□□□□ -0.96
BRCA1-213ENST00000476777 MINOS1-NBL1R4GNA1 71 aa9.05□□□□□ -0.96
BRCA1-213ENST00000476777 MEX3AA1L020 520 aaKnown RBP9.04□□□□□ -0.96
BRCA1-213ENST00000476777 H3BUI4 141 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 SLC22A2O15244 555 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 AMY1AP04745 511 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 AMY2AP04746 511 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 BLVRAP53004 296 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 SF3A3Q12874 501 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-213ENST00000476777 GLYATQ6IB77 296 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 PIGWQ7Z7B1 504 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 ERI1Q8IV48 349 aaKnown RBP9.04□□□□□ -0.96
BRCA1-213ENST00000476777 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 OR5A2Q8NGI9 324 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 RP9Q8TA86 221 aaKnown RBP9.04□□□□□ -0.96
BRCA1-213ENST00000476777 TFAP2CQ92754 450 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 AKR1E2Q96JD6 320 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 INTS14Q96SY0 518 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 ASCL2Q99929 193 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF649Q9BS31 505 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 LIN7BQ9HAP6 207 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 V9GYQ6 96 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 STARD9Q9P2P6 4700 aa9.04□□□□□ -0.96
BRCA1-213ENST00000476777 LCE6AA0A183 80 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 SH2D7A6NKC9 451 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-213ENST00000476777 OR5B21A6NL26 309 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 K7N7A8 449 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 RAMP3O60896 148 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 NOS1APO75052 506 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-213ENST00000476777 H2BFMP0C1H6 154 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 PGA5P0DJD9 388 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 CD24P25063 80 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 RRM2P31350 389 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 ACTA2P62736 377 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 RPL23AP62750 156 aaKnown RBP9.03□□□□□ -0.96
BRCA1-213ENST00000476777 ACTG2P63267 376 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 ACTC1P68032 377 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 ACTA1P68133 377 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 DOC2BQ14184 412 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 C18orf65Q6ZTR6 163 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 TCF23Q7RTU1 214 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 OSR2Q8N2R0 312 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 NDNFQ8TB73 568 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 FAM81AQ8TBF8 368 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 P2RX4Q99571 388 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 NRIP2Q9BQI9 281 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 BTBD10Q9BSF8 475 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 VIPAS39Q9H9C1 493 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 TBC1D23Q9NUY8 699 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 VNN3Q9NY84 501 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 ABCD2Q9UBJ2 740 aa9.03□□□□□ -0.96
BRCA1-213ENST00000476777 IGHV2-26A0A0B4J1V2 119 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 COX4I1P13073 169 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 GSTT1P30711 240 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 MAP2K3P46734 347 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 NUDT2P50583 147 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
BRCA1-213ENST00000476777 IL18R1Q13478 541 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 CGB2Q6NT52 195 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 RASSF6Q6ZTQ3 369 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 MOB3CQ70IA8 216 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 SHFQ7M4L6 423 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 OR2W3Q7Z3T1 314 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-213ENST00000476777 OR9Q2Q8NGE9 314 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 OR4Q3Q8NH05 313 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 BCAS4Q8TDM0 211 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 CAPSLQ8WWF8 208 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 PYURFQ96I23 114 aa9.02□□□□□ -0.97
BRCA1-213ENST00000476777 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms