RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GPR84Q9NQS5 396 aa10.62□□□□□ -0.71
MRPL55-228ENST00000476267 SERTAD4Q9NUC0 356 aa10.62□□□□□ -0.71
MRPL55-228ENST00000476267 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
MRPL55-228ENST00000476267 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
MRPL55-228ENST00000476267 COPS3Q9UNS2 423 aa10.62□□□□□ -0.71
MRPL55-228ENST00000476267 RFPL4AA6NLU0 287 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 RFPL4AL1F8VTS6 287 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 PSMD9O00233 223 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 TTRP02766 147 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 CCL3L1P16619 93 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 MPZP25189 248 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
MRPL55-228ENST00000476267 RPL31P62899 125 aaKnown RBP10.61□□□□□ -0.71
MRPL55-228ENST00000476267 GNGT1P63211 74 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 RIPPLY1Q0D2K3 151 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 APOFQ13790 326 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 LDLRAD2Q5SZI1 272 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 TMEM236Q5W0B7 351 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
MRPL55-228ENST00000476267 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
MRPL55-228ENST00000476267 MOB3CQ70IA8 216 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 OR2T6Q8NHC8 308 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 CANT1Q8WVQ1 401 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 NSL1Q96IY1 281 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 CLPTM1LQ96KA5 538 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 NRIP2Q9BQI9 281 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 HEXA-AS1Q9H8Q6 139 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 USE1Q9NZ43 259 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 PIGLQ9Y2B2 252 aa10.61□□□□□ -0.71
MRPL55-228ENST00000476267 PQLC2LA1A4F0 135 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 C17orf98A8MV24 154 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 J3QT63 122 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 ZNF254O75437 659 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 DHRS3O75911 302 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 CALB2P22676 271 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 PRDX2P32119 198 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 ERVK11-1P61568 191 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 CALHM1Q8IU99 346 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 CCDC124Q96CT7 223 aaKnown RBP10.6□□□□□ -0.71
MRPL55-228ENST00000476267 MROQ9BYG7 248 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 ENPP5Q9UJA9 477 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 V9GYS6 101 aa10.6□□□□□ -0.71
MRPL55-228ENST00000476267 KMT2CQ8NEZ4 4911 aaKnown RBP10.6□□□□□ -0.71
MRPL55-228ENST00000476267 A0A1B0GTI1 187 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 A0A1W2PPH5 198 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 SLC1A7O00341 560 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 NRASP01111 189 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 PRB2P02812 416 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-228ENST00000476267 TK1P04183 234 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 MRPL3P09001 348 aaKnown RBP10.59□□□□□ -0.71
MRPL55-228ENST00000476267 ANXA8P13928 327 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 PRKACGP22612 351 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 HAAOP46952 286 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 CAPZA1P52907 286 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 RPS7P62081 194 aaKnown RBP10.59□□□□□ -0.71
MRPL55-228ENST00000476267 HABP2Q14520 560 aaPredicted RBP10.59□□□□□ -0.71
MRPL55-228ENST00000476267 LCN1P1Q5VSP4 162 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 TCF23Q7RTU1 214 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 OR4M1Q8NGD0 313 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 OR2T27Q8NH04 317 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 CDCA4Q9BXL8 241 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 TTTY10Q9BZA0 68 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 TCF19Q9Y242 345 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 ZNF281Q9Y2X9 895 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 DSCAML1Q8TD84 2053 aa10.59□□□□□ -0.71
MRPL55-228ENST00000476267 A6NDX4 124 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 DLGAP1O14490 977 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF737O75373 536 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 E2F6O75461 281 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 RBP4P02753 201 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 VSIG10L2P0DP72 767 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 CD28P10747 220 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 COX7A1P24310 79 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 EFNB1P98172 346 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF684Q5T5D7 378 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF626Q68DY1 528 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF782Q6ZMW2 699 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-228ENST00000476267 REC114Q7Z4M0 266 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ELMOD2Q8IZ81 293 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 OR14K1Q8NGZ2 314 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 ASB17Q8WXJ9 295 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 LRGUKQ96M69 825 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 WNT10AQ9GZT5 417 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 MOB1AQ9H8S9 216 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 GPR173Q9NS66 373 aa10.58□□□□□ -0.72
MRPL55-228ENST00000476267 TBL2Q9Y4P3 447 aaKnown RBP10.58□□□□□ -0.72
MRPL55-228ENST00000476267 DHRS7CA6NNS2 312 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms