RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CD160O95971 181 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 HBE1P02100 147 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 ERCC1P07992 297 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 ME2P23368 584 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 STOMP27105 288 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 RAB7AP51149 207 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 SIGLEC14Q08ET2 396 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 BZW1Q7L1Q6 419 aaKnown RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 RTN4IP1Q8WWV3 396 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 CPB2Q96IY4 423 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 RNF145Q96MT1 663 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 LLPHQ9BRT6 129 aaKnown RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 TMEM175Q9BSA9 504 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 GGTLC1Q9BX51 225 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 UCK2Q9BZX2 261 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 SLC7A5P2Q9GIP4 190 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 MRM3Q9HC36 420 aaKnown RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 CCNB1IP1Q9NPC3 277 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 XPNPEP1Q9NQW7 623 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 SLC39A1Q9NY26 324 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 WIF1Q9Y5W5 379 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 SIP14410 1827 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 MYH9P35579 1960 aaKnown RBP2.65□□□□□ -1.99
PTCD3-211ENST00000476215 SCN1AP35498 2009 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 LOXHD1Q8IVV2 1947 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 SMIM26A0A096LP01 95 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 IGHV1-69DA0A0B4J2H0 117 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 CENPVL3A0A0U1RRI6 287 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 KRBOX1C9JBD0 128 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 K7EM74 188 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 NEMFO60524 1076 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 CDRT1O95170 752 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 TALDO1P37837 337 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 OR1G1P47890 313 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 GFERP55789 205 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 CYP24A1Q07973 514 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 RNASE13Q5GAN3 156 aaKnown RBP2.64□□□□□ -1.99
PTCD3-211ENST00000476215 TMEM220Q6QAJ8 160 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 ALKAL1Q6UXT8 129 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 SSX9Q7RTT3 188 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 TTLQ8NG68 377 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 ERMNQ8TAM6 284 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF707Q96C28 371 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF717Q9BY31 904 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-211ENST00000476215 POMKQ9H5K3 350 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 ACP6Q9NPH0 428 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 C20orf96Q9NUD7 363 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-211ENST00000476215 SLC17A7Q9P2U7 560 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 HES2Q9Y543 173 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 GVINP1Q7Z2Y8 2422 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 COL27A1Q8IZC6 1860 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-211ENST00000476215 FAM186AA6NE01 2351 aa2.64□□□□□ -1.99
PTCD3-211ENST00000476215 RALGAPA2Q2PPJ7 1873 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 DMXL1Q9Y485 3027 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 KBTBD11-OT1A0A1B0GTJ5 212 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 A6NDN8 102 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 LRRIQ4A6NIV6 560 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 PDZK1P1A8MUH7 402 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 A8MUU9 505 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 TEX46H3BTG2 121 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 GABRPO00591 440 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 HPRT1P00492 218 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CLTAP09496 248 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 LOXP28300 417 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CCT6AP40227 531 aaKnown RBP2.63□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF121P58317 390 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-211ENST00000476215 TAS2R46P59540 309 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF616Q08AN1 781 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 NCF4Q15080 339 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 PRR9Q5T870 116 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CD300LGQ6UXG3 332 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 UNQ9165/PRO28630Q6UXU0 137 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 ZBTB8OSQ8IWT0 167 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 LRRC52Q8N7C0 313 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 OR10G6Q8NH81 332 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 C17orf50Q8WW18 174 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 C8orf76Q96K31 380 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 C11orf70Q9BRQ4 267 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 SAMD10Q9BYL1 202 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 SLIRPQ9GZT3 109 aaKnown RBP2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CXCL16Q9H2A7 254 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 EXOSC4Q9NPD3 245 aaKnown RBP2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CLN6Q9NWW5 311 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 CLN8Q9UBY8 286 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 SIGLEC9Q9Y336 463 aa2.63□□□□□ -1.99
PTCD3-211ENST00000476215 NLRC5Q86WI3 1866 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 IGHV7-4-1A0A0J9YVY3 117 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 TRAPPC3O43617 180 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 EIF1BO60739 113 aaKnown RBP2.62□□□□□ -1.99
PTCD3-211ENST00000476215 GLSO94925 669 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-211ENST00000476215 IGLV3-25P01717 112 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 IGHV3-11P01762 117 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 CTRB1P17538 263 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 RAB4AP20338 218 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 EIF1P41567 113 aaKnown RBP2.62□□□□□ -1.99
PTCD3-211ENST00000476215 KPRPQ5T749 579 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-211ENST00000476215 TMEM53Q6P2H8 277 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 DAW1Q8N136 415 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 JAGN1Q8N5M9 183 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms