RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 DYNC2LI1Q8TCX1 351 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 FRZBQ92765 325 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 CDS1Q92903 461 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 FLYWCH2Q96CP2 140 aaKnown RBP3.48□□□□□ -1.85
SMC5-203ENST00000475540 RBBP8Q99708 897 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 NXF2Q9GZY0 626 aaKnown RBP3.48□□□□□ -1.85
SMC5-203ENST00000475540 ABCB9Q9NP78 766 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 CD84Q9UIB8 345 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 FBXL3Q9UKT7 428 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 COL1A2P08123 1366 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 GOLGA8KD6RF30 607 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 GOLGA8MH3BSY2 632 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 UBDO15205 165 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 TCAPO15273 167 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 CD5LO43866 347 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 SHOX2O60902 331 aaPredicted RBP3.47□□□□□ -1.85
SMC5-203ENST00000475540 ADAP1O75689 374 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RAB36O95755 333 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 ORM1P02763 201 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 CTSLP07711 333 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 MMP7P09237 267 aaPredicted RBP3.47□□□□□ -1.85
SMC5-203ENST00000475540 OCM2P0CE71 109 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 GTF2H1P32780 548 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RPL14P50914 215 aaKnown RBP3.47□□□□□ -1.85
SMC5-203ENST00000475540 SYNJ2BPP57105 145 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RAB38P57729 211 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 TAS2R31P59538 309 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RHOAP61586 193 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 IL5RAQ01344 420 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RGNQ15493 299 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 CDNFQ49AH0 187 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 COQ5Q5HYK3 327 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 OR10J3Q5JRS4 329 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 TIMM23BQ5SRD1 257 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 AVPI1Q5T686 147 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 NANOGP8Q6NSW7 305 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 FBXW12Q6X9E4 464 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 PAGE2Q7Z2X7 111 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 PRSS58Q8IYP2 241 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 SPICQ8N5J4 248 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 LFNGQ8NES3 379 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 OR4K17Q8NGC6 315 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 OR8J2Q8NGG1 315 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 OR1S1Q8NH92 325 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 RXFP2Q8WXD0 754 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 BMFQ96LC9 184 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 ZNF488Q96MN9 340 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 Q96MT0 163 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 APOL4Q9BPW4 351 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 TOLLIPQ9H0E2 274 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 NSRP1Q9H0G5 558 aaKnown RBP3.47□□□□□ -1.85
SMC5-203ENST00000475540 LRRC19Q9H756 370 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 PSTPIP2Q9H939 334 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 TMEM27Q9HBJ8 222 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 VAX2Q9UIW0 290 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 MAP3K5Q99683 1374 aa3.47□□□□□ -1.85
SMC5-203ENST00000475540 SMIM23A6NLE4 172 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 C9J4A7 227 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 SLC31A1O15431 190 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 FABP7O15540 132 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 DEXIO95424 95 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 HAAOP46952 286 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 NDUFA8P51970 172 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 TAS2R46P59540 309 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 GINS1Q14691 196 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 NIPAL1Q6NVV3 410 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 C8orf74Q6P047 294 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 CYP4Z2PQ8N1L4 340 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 ZNF615Q8N8J6 731 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 DNAJB3Q8WWF6 145 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 CPNE4Q96A23 557 aaPredicted RBP3.46□□□□□ -1.86
SMC5-203ENST00000475540 WDR34Q96EX3 536 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 PLEKHJ1Q9NW61 149 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 OPN4Q9UHM6 478 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 ANXA10Q9UJ72 324 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 NDRG2Q9UN36 371 aaKnown RBP3.46□□□□□ -1.86
SMC5-203ENST00000475540 PSG8Q9UQ74 426 aa3.46□□□□□ -1.86
SMC5-203ENST00000475540 YTHDF2Q9Y5A9 579 aaKnown RBP3.46□□□□□ -1.86
SMC5-203ENST00000475540 NUP153P49790 1475 aaKnown RBP3.46□□□□□ -1.86
SMC5-203ENST00000475540 BRCA1P38398 1863 aaKnown RBP3.45□□□□□ -1.86
SMC5-203ENST00000475540 IGHV1-69DA0A0B4J2H0 117 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 ZNF233A6NK53 670 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 J3QT63 122 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
SMC5-203ENST00000475540 GLSO94925 669 aaPredicted RBP3.45□□□□□ -1.86
SMC5-203ENST00000475540 PSMG1O95456 288 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 HLA-DPB1P04440 258 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 LIMS3P0CW19 117 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 LIMS4P0CW20 117 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 PSKH1P11801 424 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 ZNF35P13682 527 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 OMGP23515 440 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 HLA-DMAP28067 261 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 TALDO1P37837 337 aa3.45□□□□□ -1.86
SMC5-203ENST00000475540 ERFP50548 548 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms