RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FAM90A23PA8MXZ1 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 RFPL4AL1F8VTS6 287 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 J3QW42 95 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 ERVH48-1M5A8F1 160 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 AQP7O14520 342 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 SPRY1O43609 319 aaPredicted RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 ANGPTL7O43827 346 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 TOXO94900 526 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 HTR3BO95264 441 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 SIX6O95475 246 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 DUS4LO95620 317 aaKnown RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A15PP0C7V4 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A13PP0C7W8 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A14PP0C7W9 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A24PP0C7X0 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 AMY2BP19961 511 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 CD34P28906 385 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 HTR2BP41595 481 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 ECI1P42126 302 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 SNU13P55769 128 aaKnown RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 SEC61A1P61619 476 aaKnown RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 RAB1AP62820 205 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OPCMLQ14982 345 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 DAZAP2Q15038 168 aaPredicted RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 RSU1Q15404 277 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 SURF2Q15527 256 aaPredicted RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 GRK1Q15835 563 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 NHLRC3Q5JS37 347 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 C9orf135Q5VTT2 229 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 AADACL3Q5VUY0 350 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 PLCXD3Q63HM9 321 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 RPUSD3Q6P087 351 aaKnown RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 OVCH2Q7RTZ1 564 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 C6orf201Q7Z4U5 140 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 TMEM200AQ86VY9 491 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OSR2Q8N2R0 312 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 CSNK2A3Q8NEV1 391 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OR5AP2Q8NGF4 316 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OR8H1Q8NGG4 311 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OR56B2PQ8NGI1 322 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OR5H2Q8NGV7 314 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 OR13G1Q8NGZ3 307 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 HPSE2Q8WWQ2 592 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 FGF23Q9GZV9 251 aaPredicted RBP8.47□□□□□ -1.05
USP39-214ENST00000474572 C5orf66Q9H5L9 145 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 PCDHB16Q9NRJ7 776 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 DECR2Q9NUI1 292 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 AUP1Q9Y679 476 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 NCOR1O75376 2440 aa8.46□□□□□ -1.05
USP39-214ENST00000474572 FREM1Q5H8C1 2179 aa8.46□□□□□ -1.05
USP39-214ENST00000474572 DMDP11532 3685 aa8.46□□□□□ -1.05
USP39-214ENST00000474572 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
USP39-214ENST00000474572 RPS10-NUDT3A0A1W2PQS6 291 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 LINC00862A6NCI5 91 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 TUBAL3A6NHL2 446 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 ZNF891A8MT65 544 aaPredicted RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 PRSS44E7EML9 344 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 L7N2F9 121 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 M0R233 179 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 CSTBP04080 98 aaKnown RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 CD79AP11912 226 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 SLC25A4P12235 298 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 CEACAM1P13688 526 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 RPA2P15927 270 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 NFYAP23511 347 aaPredicted RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 GABRR1P24046 479 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 SSTR2P30874 369 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 CCL11P51671 97 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 PRSS12P56730 875 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 PMP22Q01453 160 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 PLP2Q04941 152 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 MALLQ13021 153 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 CLN3Q13286 438 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 TMEM128Q5BJH2 165 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 ZNF660Q6AZW8 331 aaPredicted RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 ELP2Q6IA86 826 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 TMEM65Q6PI78 240 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 TFAP2EQ6VUC0 442 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 TMEM17Q86X19 198 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 ADAD2Q8NCV1 583 aaKnown RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 PIGCQ92535 297 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 ELMOD3Q96FG2 381 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 WBP1Q96G27 269 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 PRRX2Q99811 253 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 PPA2Q9H2U2 334 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 ELL3Q9HB65 397 aaPredicted RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 GPR160Q9UJ42 338 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 STARD10Q9Y365 291 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 NOP16Q9Y3C1 178 aaKnown RBP8.46□□□□□ -1.06
USP39-214ENST00000474572 AHCTF1Q8WYP5 2266 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 OTOGLQ3ZCN5 2332 aa8.46□□□□□ -1.06
USP39-214ENST00000474572 IGKV1D-8A0A087WSZ0 117 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 C5orf49A4QMS7 147 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 ZNF850A8MQ14 1090 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 TSC22D2O75157 780 aa8.45□□□□□ -1.06
USP39-214ENST00000474572 SFT2D2O95562 160 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms