RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 OR11H6Q8NGC7 330 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 THEM6Q8WUY1 208 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 OR51V1Q9H2C8 321 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 SPAG4Q9NPE6 437 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 ABCB10Q9NRK6 738 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 OR14J1Q9UGF5 321 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 LRP12Q9Y561 859 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 BIRC6Q9NR09 4857 aa10.07□□□□□ -0.8
TRAF4-209ENST00000473421 HUWE1Q7Z6Z7 4374 aaKnown RBP10.07□□□□□ -0.8
TRAF4-209ENST00000473421 TNFRSF11BO00300 401 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 LPLP06858 475 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 PGA5P0DJD9 388 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 DYNC1I2Q13409 638 aaKnown RBP10.06□□□□□ -0.8
TRAF4-209ENST00000473421 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 RPL13AP3Q6NVV1 102 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 CENPVQ7Z7K6 275 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-209ENST00000473421 MRPL41Q8IXM3 137 aaKnown RBP10.06□□□□□ -0.8
TRAF4-209ENST00000473421 FTMTQ8N4E7 242 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 OTOSQ8NHW6 89 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 ZNF671Q8TAW3 534 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 RCC1LQ96I51 464 aaKnown RBP10.06□□□□□ -0.8
TRAF4-209ENST00000473421 HIST1H2AAQ96QV6 131 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 NIPSNAP1Q9BPW8 284 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 NRIP2Q9BQI9 281 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 C1orf21Q9H246 121 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 CMC2Q9NRP2 79 aa10.06□□□□□ -0.8
TRAF4-209ENST00000473421 TBL2Q9Y4P3 447 aaKnown RBP10.06□□□□□ -0.8
TRAF4-209ENST00000473421 A6NIN4 97 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 ZNF737O75373 536 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 APOC1P02654 83 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 LYNP07948 512 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 CHRM2P08172 466 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 DYNLT3P51808 116 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 PSMA6P60900 246 aaKnown RBP10.05□□□□□ -0.8
TRAF4-209ENST00000473421 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-209ENST00000473421 UTF1Q5T230 341 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 LCN8Q6JVE9 175 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 HDXQ7Z353 690 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-209ENST00000473421 TPRX1Q8N7U7 411 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 DTX3Q8N9I9 347 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 BBS1Q8NFJ9 593 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 OR2T33Q8NG76 320 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 OR5A2Q8NGI9 324 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 FAM81AQ8TBF8 368 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 BCAS4Q8TDM0 211 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 TEAD3Q99594 435 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 MYLK2Q9H1R3 596 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 HES4Q9HCC6 221 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 ABCB9Q9NP78 766 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 FAM206AQ9NX38 181 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 RASL12Q9NYN1 266 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-209ENST00000473421 U3KQV3 271 aa10.05□□□□□ -0.8
TRAF4-209ENST00000473421 TMEM82A0PJX8 343 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 RIIAD1A6NNX1 92 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 K7N7A8 449 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 F2RL2O00254 374 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 SLC1A7O00341 560 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 NDUFAB1O14561 156 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 CCNB2O95067 398 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ZNF728P0DKX0 622 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 HSD17B1P14061 328 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 MAP2K3P46734 347 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 HAAOP46952 286 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ACTA2P62736 377 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ACTG2P63267 376 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ACTC1P68032 377 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ACTA1P68133 377 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 COL10A1Q03692 680 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 MFGE8Q08431 387 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-209ENST00000473421 SMIM21Q3B7S5 101 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ABCA11PQ4W5N1 156 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 PLBD1Q6P4A8 553 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 SHFQ7M4L6 423 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 RNF144BQ7Z419 303 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 ANGPTL5Q86XS5 388 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
TRAF4-209ENST00000473421 NSMCE2Q96MF7 247 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 TTTY10Q9BZA0 68 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 NIPAL2Q9H841 368 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 GPR84Q9NQS5 396 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 GPR173Q9NS66 373 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 PIGLQ9Y2B2 252 aa10.04□□□□□ -0.8
TRAF4-209ENST00000473421 STAB2Q8WWQ8 2551 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 PQLC2LA1A4F0 135 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 OR5B21A6NL26 309 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 J3QT63 122 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 MAGEB4O15481 346 aaPredicted RBP10.03□□□□□ -0.8
TRAF4-209ENST00000473421 CCDC22O60826 627 aa10.03□□□□□ -0.8
TRAF4-209ENST00000473421 NOS1APO75052 506 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms