RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TCF19Q9Y242 345 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 TBL2Q9Y4P3 447 aaKnown RBP7.39□□□□□ -1.23
CPSF4-211ENST00000471455 LYVE1Q9Y5Y7 322 aa7.39□□□□□ -1.23
CPSF4-211ENST00000471455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-211ENST00000471455 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF732B4DXR9 585 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 F2RL2O00254 374 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 ARPC2O15144 300 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 MTRF1O75570 445 aaKnown RBP7.38□□□□□ -1.23
CPSF4-211ENST00000471455 DUS4LO95620 317 aaKnown RBP7.38□□□□□ -1.23
CPSF4-211ENST00000471455 BPNT1O95861 308 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 PF4V1P10720 104 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 CD28P10747 220 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 CLUP10909 449 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 ACKR3P25106 362 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 DCTDP32321 178 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 VDAC2P45880 294 aaPredicted RBP7.38□□□□□ -1.23
CPSF4-211ENST00000471455 SLC35A2P78381 396 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 DCTN2Q13561 401 aaKnown RBP7.38□□□□□ -1.23
CPSF4-211ENST00000471455 CEACAM21Q3KPI0 293 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 LINC01590Q5TEZ4 76 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 LCN1P1Q5VSP4 162 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 COMMD2Q86X83 199 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 CALHM1Q8IU99 346 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 LYG1Q8N1E2 194 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 OR8D4Q8NGM9 314 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 OR13D1Q8NGV5 346 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 OTULINQ96BN8 352 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 AJUBAQ96IF1 538 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 CITED2Q99967 270 aaPredicted RBP7.38□□□□□ -1.23
CPSF4-211ENST00000471455 BTBD10Q9BSF8 475 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 OR51I2Q9H344 312 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 YY1AP1Q9H869 796 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 C19orf12Q9NSK7 152 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 SERTAD4Q9NUC0 356 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 ARMC1Q9NVT9 282 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 POLDIP2Q9Y2S7 368 aa7.38□□□□□ -1.23
CPSF4-211ENST00000471455 ACOD1A6NK06 481 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 H3BS24 57 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 PAX4O43316 350 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 RHBDL1O75783 438 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 SOX14O95416 240 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 MPIG6BO95866 241 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 GASTP01350 101 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 RBP4P02753 201 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 H2AFXP16104 143 aaPredicted RBP7.37□□□□□ -1.23
CPSF4-211ENST00000471455 AZGP1P25311 298 aaKnown RBP7.37□□□□□ -1.23
CPSF4-211ENST00000471455 OR12D2P58182 307 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 GK3PQ14409 553 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 HSP90B2PQ58FF3 399 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 FOXB2Q5VYV0 432 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 PLCXD3Q63HM9 321 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF770Q6IQ21 691 aaPredicted RBP7.37□□□□□ -1.23
CPSF4-211ENST00000471455 HAGHLQ6PII5 290 aaPredicted RBP7.37□□□□□ -1.23
CPSF4-211ENST00000471455 PGAM4Q8N0Y7 254 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 POC1AQ8NBT0 407 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 OR8B12Q8NGG6 310 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 OR5A2Q8NGI9 324 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 OR4Q3Q8NH05 313 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 OTOSQ8NHW6 89 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 THEM6Q8WUY1 208 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 CAPSLQ8WWF8 208 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 AQP3Q92482 292 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 DPF1Q92782 380 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 MALSU1Q96EH3 234 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 RCC1LQ96I51 464 aaKnown RBP7.37□□□□□ -1.23
CPSF4-211ENST00000471455 AKR1E2Q96JD6 320 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 TEX12Q9BXU0 123 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 DGCR6LQ9BY27 220 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 PPP1R3EQ9H7J1 279 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 REEP1Q9H902 201 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 C19orf73Q9NVV2 129 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF319Q9P2F9 582 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 ENPP5Q9UJA9 477 aa7.37□□□□□ -1.23
CPSF4-211ENST00000471455 A0A0U1RQV5 110 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 A6NDX4 124 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 RFPL4AA6NLU0 287 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 PRR23D1E9PI22 279 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-211ENST00000471455 E9PQ18 207 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 RFPL4AL1F8VTS6 287 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 H3BN98 237 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 J3QT63 122 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 PRODHO43272 600 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 DNAJC8O75937 253 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-211ENST00000471455 NXPH2O95156 264 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 TFF1P04155 84 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 ARG1P05089 322 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 PRR23D2P0DMB1 279 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-211ENST00000471455 PRDX2P32119 198 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 DYNLT3P51808 116 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 MNAT1P51948 309 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 ARHGDIBP52566 201 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 RIPPLY1Q0D2K3 151 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 IL18R1Q13478 541 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
CPSF4-211ENST00000471455 PLA1AQ53H76 456 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 CEP78Q5JTW2 689 aa7.36□□□□□ -1.23
CPSF4-211ENST00000471455 ZNF684Q5T5D7 378 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms