RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 OCMP0CE72 109 aaPredicted RBP4.33□□□□□ -1.72
SMC5-202ENST00000471372 GTF2H1P32780 548 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 PSMB2P49721 201 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 ZNHIT3Q15649 155 aaPredicted RBP4.33□□□□□ -1.72
SMC5-202ENST00000471372 PLCZ1Q86YW0 608 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 ENKURQ8TC29 256 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 S100PBPQ96BU1 408 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 RILPQ96NA2 401 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 DSN1Q9H410 356 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 WDR54Q9H977 334 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 ASCL3Q9NQ33 180 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 LHX9Q9NQ69 397 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 IMP3Q9NV31 184 aaKnown RBP4.33□□□□□ -1.72
SMC5-202ENST00000471372 ENPP4Q9Y6X5 453 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 LRP4O75096 1905 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 COL2A1P02458 1487 aaPredicted RBP4.32□□□□□ -1.72
SMC5-202ENST00000471372 IGHV3-72A0A0B4J1Y9 119 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 OR5H1A6NKK0 313 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 KLRC4-KLRK1H3BQV0 150 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 TCAPO15273 167 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 CHST10O43529 356 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 IGKV5-2P06315 115 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 RPA3P35244 121 aaPredicted RBP4.32□□□□□ -1.72
SMC5-202ENST00000471372 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 CEACAM21Q3KPI0 293 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 SLC25A35Q3KQZ1 300 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 TSPO2Q5TGU0 170 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 CLEC19AQ6UXS0 136 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 FUNDC1Q8IVP5 155 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 OR4M1Q8NGD0 313 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 OR4K2Q8NGD2 314 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 PHF10Q8WUB8 498 aaKnown RBP4.32□□□□□ -1.72
SMC5-202ENST00000471372 BLNKQ8WV28 456 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 RBMXL1Q96E39 390 aaKnown RBP4.32□□□□□ -1.72
SMC5-202ENST00000471372 SNF8Q96H20 258 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 CDX2Q99626 313 aaPredicted RBP4.32□□□□□ -1.72
SMC5-202ENST00000471372 ABCB9Q9NP78 766 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 TAS2R13Q9NYV9 303 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 DNAJC27Q9NZQ0 273 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 PSMD13Q9UNM6 376 aa4.32□□□□□ -1.72
SMC5-202ENST00000471372 C2orf16Q68DN1 1984 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 ELP1O95163 1332 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 IGKV6-21A0A0C4DH24 114 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 RBFOX3A6NFN3 312 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 KLLNB2CW77 178 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 J3QLI3 93 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 BPY2O14599 106 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 IGHV3-11P01762 117 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 RLN2P04090 185 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 OR56A5P0C7T3 313 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 ZNF806P0C7X5 589 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 IL3RAP26951 378 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 ZNF133P52736 654 aaPredicted RBP4.31□□□□□ -1.72
SMC5-202ENST00000471372 RNASE13Q5GAN3 156 aaKnown RBP4.31□□□□□ -1.72
SMC5-202ENST00000471372 TIMM23BQ5SRD1 257 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 PLEKHG7Q6ZR37 379 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 BBS7Q8IWZ6 715 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 ACTL9Q8TC94 416 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 WDR34Q96EX3 536 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 SMIM8Q96KF7 97 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 QKIQ96PU8 341 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMC5-202ENST00000471372 OR2M4Q96R27 311 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 RSG1Q9BU20 258 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 NUDT9Q9BW91 350 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 PLEKHF2Q9H8W4 249 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 ZNF223Q9UK11 482 aaPredicted RBP4.31□□□□□ -1.72
SMC5-202ENST00000471372 LRRC42Q9Y546 428 aa4.31□□□□□ -1.72
SMC5-202ENST00000471372 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 CYSRT1A8MQ03 144 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 MPZL2O60487 215 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 EIF1BO60739 113 aaKnown RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 LIMS3P0CW19 117 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 LIMS4P0CW20 117 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 PET100P0DJ07 73 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 EIF1P41567 113 aaKnown RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 ERFP50548 548 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 GRB2P62993 217 aaKnown RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 EXOC3L4Q17RC7 722 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 TMEM249Q2WGJ8 235 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ZNF658BQ4V348 819 aaPredicted RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 C2orf83Q53S99 150 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ACTBL2Q562R1 376 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 UGT2A3Q6UWM9 527 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 Q6ZR03 302 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ZNF786Q8N393 782 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 CYB561D1Q8N8Q1 229 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 OR4M2Q8NGB6 313 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 OR1L1Q8NH94 360 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 NELFBQ8WX92 580 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 C22orf15Q8WYQ4 148 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ASB8Q9H765 288 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 METTL8Q9H825 291 aaKnown RBP4.3□□□□□ -1.72
SMC5-202ENST00000471372 RDH14Q9HBH5 336 aa4.3□□□□□ -1.72
SMC5-202ENST00000471372 ZNRD1Q9P1U0 126 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms