RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ARL6IP1Q15041 203 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PNLIPRP3Q17RR3 467 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PCGF3Q3KNV8 242 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 ZNF718Q3SXZ3 478 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PLAC9Q5JTB6 97 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 SLC25A26Q70HW3 274 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 TMEM200AQ86VY9 491 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 ZNF573Q86YE8 665 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 Q8NFD4 153 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 OR10K1Q8NGX5 313 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 DVL3Q92997 716 aaPredicted RBP8.03□□□□□ -1.12
VPS52-216ENST00000471309 RAB3CQ96E17 227 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 SEH1LQ96EE3 360 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 NEDD4LQ96PU5 975 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 MICU1Q9BPX6 476 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 ADAT1Q9BUB4 502 aaKnown RBP8.03□□□□□ -1.12
VPS52-216ENST00000471309 RTL8AQ9BWD3 113 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PKIBQ9C010 78 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 SELENOIQ9C0D9 397 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 DPAGT1Q9H3H5 408 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 COPZ2Q9P299 210 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 PURGQ9UJV8 347 aaKnown RBP8.03□□□□□ -1.12
VPS52-216ENST00000471309 OSGIN2Q9Y236 505 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
VPS52-216ENST00000471309 A0A1B0GWJ7 208 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 LRP5LA4QPB2 252 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 TMEM235A6NFC5 223 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CCL21O00585 134 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 SOCS1O15524 211 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CA11O75493 328 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 HTR3BO95264 441 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CYB5AP00167 134 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 GNB3P16520 340 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 MPZP25189 248 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 GCH1P30793 250 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CHRNB4P30926 498 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 RCVRNP35243 200 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 FAUP35544 74 aaKnown RBP8.02□□□□□ -1.13
VPS52-216ENST00000471309 HAAOP46952 286 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 BCAP31P51572 246 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 RPS23P62266 143 aaKnown RBP8.02□□□□□ -1.13
VPS52-216ENST00000471309 NKX6-1P78426 367 aaPredicted RBP8.02□□□□□ -1.13
VPS52-216ENST00000471309 IL24Q13007 206 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 SNTB2Q13425 540 aaKnown RBP8.02□□□□□ -1.13
VPS52-216ENST00000471309 FBXL19-AS1Q494R0 122 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CDNFQ49AH0 187 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 PLA1AQ53H76 456 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 TMEM255AQ5JRV8 349 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 ELP2Q6IA86 826 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 RGS7BPQ6MZT1 257 aaPredicted RBP8.02□□□□□ -1.13
VPS52-216ENST00000471309 PLET1Q6UQ28 207 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 TMEM108Q6UXF1 575 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 MKXQ8IYA7 352 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 OSR2Q8N2R0 312 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CHST4Q8NCG5 386 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 OR8G5Q8NG78 346 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 OR51T1Q8NGJ9 327 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 OR8S1Q8NH09 359 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 OR51F2Q8NH61 342 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 ST8SIA4Q92187 359 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 CREB3L1Q96BA8 519 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 RNF170Q96K19 258 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 RHOFQ9HBH0 211 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 HRASLSQ9HDD0 168 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 MGAQ8IWI9 3026 aa8.02□□□□□ -1.13
VPS52-216ENST00000471309 SHANK1Q9Y566 2161 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A10PA6NDY2 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A18PA6NE21 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A16PA6NEW6 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A20PA6NIJ5 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A8PA6NJQ4 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A7PA6NKC0 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 TMEM210A6NLX4 147 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 SERPINE3A8MV23 424 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A22PA8MWA6 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A12PA8MX19 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A5PA8MXJ8 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A23PA8MXZ1 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 ATP6V1G2-DDX39BF2Z307 99 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 J3QT63 122 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 TIMM8AO60220 97 aaPredicted RBP8.01□□□□□ -1.13
VPS52-216ENST00000471309 MT-ND4P03905 459 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 SFTPBP07988 381 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A15PP0C7V4 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A13PP0C7W8 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A14PP0C7W9 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 FAM90A24PP0C7X0 464 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 ZNF250P15622 560 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 CD40P25942 277 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 BLVRBP30043 206 aaPredicted RBP8.01□□□□□ -1.13
VPS52-216ENST00000471309 GLRXP35754 106 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 TMEM50BP56557 158 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 RBM11P57052 281 aaKnown RBP8.01□□□□□ -1.13
VPS52-216ENST00000471309 TAS2R19P59542 299 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 GNG2P59768 71 aa8.01□□□□□ -1.13
VPS52-216ENST00000471309 OR8G1Q15617 311 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms