RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 EXOGQ9Y2C4 368 aaKnown RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 IGHV3-64DA0A0J9YX35 117 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 FAM183AA6NL82 134 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 ANKRD30BLA7E2S9 258 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 HLA-DQB1P01920 261 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 CD80P33681 288 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 SDC2P34741 201 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 RPS19P39019 145 aaKnown RBP11.26□□□□□ -0.61
HMGN1-211ENST00000471260 CX3CR1P49238 355 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 BPIFB3P59826 476 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-211ENST00000471260 AADACL4Q5VUY2 407 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 PRAMEF6Q5VXH4 476 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 WDR25Q64LD2 544 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-211ENST00000471260 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 DOK3Q7L591 496 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 SNX29P2Q8IUI4 249 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 TIGD4Q8IY51 512 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 UPRTQ96BW1 309 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 BARHL1Q9BZE3 327 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 RGCCQ9H4X1 137 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 CLEC2DQ9UHP7 191 aa11.26□□□□□ -0.61
HMGN1-211ENST00000471260 SF3B6Q9Y3B4 125 aaKnown RBP11.26□□□□□ -0.61
HMGN1-211ENST00000471260 PRR23D1E9PI22 279 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 LGALS8O00214 317 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 LIPFP07098 398 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ANXA2P07355 339 aaKnown RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 PRR23D2P0DMB1 279 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 SLC2A1P11166 492 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ETV1P50549 477 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 UBA52P62987 128 aaKnown RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 FAM3AP98173 230 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 SLC35D3Q5M8T2 416 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 FAM201AQ5SY85 155 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 CD276Q5ZPR3 534 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF841Q6ZN19 808 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 SLC16A9Q7RTY1 509 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 PRSS45Q7RTY3 260 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 FTMTQ8N4E7 242 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF485Q8NCK3 441 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 CSNK2A3Q8NEV1 391 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 OTOSQ8NHW6 89 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ACOT12Q8WYK0 555 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 OTULINQ96BN8 352 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 SGK3Q96BR1 496 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 REEP6Q96HR9 211 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 MS4A7Q9GZW8 240 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-211ENST00000471260 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 OR51V1Q9H2C8 321 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 NIPAL2Q9H841 368 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ESM1Q9NQ30 184 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF69Q9UC07 566 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF391Q9UJN7 358 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
HMGN1-211ENST00000471260 C5orf63A6NC05 138 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 OOEPA6NGQ2 149 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 RGS13O14921 159 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 RGS5O15539 181 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ENSAO43768 121 aaKnown RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 CDRT1O95170 752 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 LHBP01229 141 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 H2BFMP0C1H6 154 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 LIMS3P0CW19 117 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 LIMS4P0CW20 117 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 IL7P13232 177 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ANOS1P23352 680 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 PRTN3P24158 256 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 CFPP27918 469 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF121P58317 390 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 TAS2R43P59537 309 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF79Q15937 498 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 PLBD1Q6P4A8 553 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 SIGLECL1Q8N7X8 197 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ZMYND19Q96E35 227 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 MED20Q9H944 212 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 SNTG1Q9NSN8 517 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 C1orf123Q9NWV4 160 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 CAB39Q9Y376 341 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-211ENST00000471260 N6AMT1Q9Y5N5 214 aa11.24□□□□□ -0.61
HMGN1-211ENST00000471260 hCG_38984A0A1B0GV85 526 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms