RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MFSD12Q6NUT3 480 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GRINAQ7Z429 371 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CPEB2Q7Z5Q1 589 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 RTN4RL2Q86UN3 420 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 ZNF595Q8IYB9 648 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 KLHDC8AQ8IYD2 350 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 LINC01555Q8NAE3 123 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CSNK2A3Q8NEV1 391 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 OR4D6Q8NGJ1 314 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 SPPL3Q8TCT6 385 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MRGPRDQ8TDS7 321 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TOMM40LQ969M1 308 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 MRPL24Q96A35 216 aaKnown RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 REEP6Q96HR9 211 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 PCGF1Q9BSM1 259 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 PCED1AQ9H1Q7 454 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 CNTD2Q9H8S5 307 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 WFDC1Q9HC57 220 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 KIAA1456Q9P272 454 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 ZNF107Q9UII5 783 aaPredicted RBP3.74□□□□□ -1.81
VPS50-210ENST00000471188 LAMA3Q16787 3333 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 GTF3C1Q12789 2109 aa3.74□□□□□ -1.81
VPS50-210ENST00000471188 TICRRQ7Z2Z1 1910 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TRBV24-1A0A075B6N3 115 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A1B0GUS0 222 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A1W2PNV4 684 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 B4DEV8 164 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF878C9JN71 531 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 H7BYZ3 331 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SMPD2O60906 423 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 MPIG6BO95866 241 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 APBA3O96018 575 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TIMP1P01033 207 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 APODP05090 189 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 H2BFMP0C1H6 154 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PRLHRP49683 370 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 DUSP8Q13202 625 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ICAM4Q14773 271 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ITPRIPL2Q3MIP1 535 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SP6Q3SY56 376 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM41BQ5BJD5 291 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TXNDC8Q6A555 127 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 OR8G2PQ6IF36 304 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GLB1LQ6UWU2 654 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM108Q6UXF1 575 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SPRED2Q7Z698 418 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 MARCH3Q86UD3 253 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF619Q8N2I2 560 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ZNF738Q8NE65 137 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SLC24A4Q8NFF2 622 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 OR52E1Q8NGJ3 308 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 THRSPQ92748 146 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PLD4Q96BZ4 506 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ACY3Q96HD9 319 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 AMELYQ99218 206 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 RNF2Q99496 336 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TCFL5Q9UL49 500 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ASCC3Q8N3C0 2202 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 NSG1A0A0A6YYJ2 146 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A1B0GU03 582 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A1W2PQ45 241 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 A0A1W2PQY0 241 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 K7N7A8 449 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CBR3O75828 277 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 DDAH2O95865 285 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 HSPB1P04792 205 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 HIST1H1TP22492 207 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 FPR2P25090 351 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 ATP6V0CP27449 155 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 CD70P32970 193 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GRK6P43250 576 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GATA4P43694 442 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GALR1P47211 349 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 HINT1P49773 126 aaPredicted RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 CNN1P51911 297 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 HNRNPA3P51991 378 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 UCP2P55851 309 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 RANP62826 216 aaKnown RBP3.73□□□□□ -1.81
VPS50-210ENST00000471188 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PRSS8Q16651 343 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 DCST2Q5T1A1 773 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 PHF19Q5T6S3 580 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 LINC01590Q5TEZ4 76 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 GPR157Q5UAW9 335 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 FCRL6Q6DN72 434 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 UNQ5815/PRO19632Q6UWF5 114 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 FBXW12Q6X9E4 464 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 DPY19L2P2Q6ZN68 376 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 Q6ZN92 141 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 Q7L0L9 218 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SYT13Q7L8C5 426 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 C16orf82Q7Z2V1 217 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 NPAS4Q8IUM7 802 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 TMEM217Q8N7C4 229 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 STPG4Q8N801 248 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 SUMF1Q8NBK3 374 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 NOXO1Q8NFA2 376 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 OR10S1Q8NGN2 331 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 IFI44Q8TCB0 444 aa3.73□□□□□ -1.81
VPS50-210ENST00000471188 RPS4Y2Q8TD47 263 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms