RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 IGKV1D-12P01611 117 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 CD8AP01732 235 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 HCKP08631 526 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 PPOXP50336 477 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 BMXP51813 675 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 MTCP1P56278 107 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 TLE4Q04727 773 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 MZT1Q08AG7 82 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 IL24Q13007 206 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 UNC119Q13432 240 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 C2orf76Q3KRA6 126 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 IDNKQ5T6J7 187 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 HES5Q5TA89 166 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 ANGPTL5Q86XS5 388 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 BHLHE23Q8NDY6 225 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 OR5H6Q8NGV6 325 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 LGALS14Q8TCE9 139 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 Q8TCH9 128 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 ERGIC1Q969X5 290 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 MRPS24Q96EL2 167 aaKnown RBP6.91□□□□□ -1.3
NPHP3-204ENST00000469232 RNF170Q96K19 258 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 PSMG3-AS1Q96PY0 264 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 SYT3Q9BQG1 590 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 NUDT16L1Q9BRJ7 211 aaKnown RBP6.91□□□□□ -1.3
NPHP3-204ENST00000469232 TM2D1Q9BX74 207 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 AKIP1Q9NQ31 210 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 C14orf119Q9NWQ9 140 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 IL19Q9UHD0 177 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 FZR1Q9UM11 496 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 MRPS28Q9Y2Q9 187 aaKnown RBP6.91□□□□□ -1.3
NPHP3-204ENST00000469232 DCHS2Q6V1P9 2916 aa6.91□□□□□ -1.3
NPHP3-204ENST00000469232 SPTAN1Q13813 2472 aaKnown RBP6.91□□□□□ -1.3
NPHP3-204ENST00000469232 A0A0A6YYH2 397 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 A0A0B4J203 849 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 TMEM272A0A1B0GTI8 110 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 A6NJ64 397 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 C17orf100A8MU93 164 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PRSS44E7EML9 344 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PYCARD-AS1I3L0S3 204 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 AKR7A2O43488 359 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF780AO75290 641 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 FSTL3O95633 263 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 IGHV1-46P01743 117 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PTBP1P26599 531 aaKnown RBP eCLIP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 TNFSF8P32971 234 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 OR3A4PP47883 348 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 POU3F4P49335 361 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 GPM6AP51674 278 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF154Q13106 437 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 OR8G1Q15617 311 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF181Q2M3W8 571 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PCGF3Q3KNV8 242 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 METAP1DQ6UB28 335 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 BIVMQ86UB2 503 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 LRRC28Q86X40 367 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 JAGN1Q8N5M9 183 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PNLDC1Q8NA58 520 aaKnown RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 OR51D1Q8NGF3 324 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 OR51T1Q8NGJ9 327 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 OR10Z1Q8NGY1 313 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 KCNG3Q8TAE7 436 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 TRMT10AQ8TBZ6 339 aaKnown RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 RAB40AQ8WXH6 277 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 AQP3Q92482 292 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 GTF3AQ92664 365 aaKnown RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 MEGF10Q96KG7 1140 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 SPACA5Q96QH8 159 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 NRIP2Q9BQI9 281 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 TRAF4Q9BUZ4 470 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 MS4A5Q9H3V2 200 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 PLGRKTQ9HBL7 147 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 HES4Q9HCC6 221 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 MSL2Q9HCI7 577 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 RABL2AQ9UBK7 228 aaPredicted RBP6.9□□□□□ -1.3
NPHP3-204ENST00000469232 DUSP13Q9UII6 198 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 RAB22AQ9UL26 194 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 RABL2BQ9UNT1 228 aa6.9□□□□□ -1.3
NPHP3-204ENST00000469232 FAM230AA0A1W2PPH8 454 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 PLSCR5A0PG75 271 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 M0R233 179 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 LHBP01229 141 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 PGA5P0DJD9 388 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 ARSBP15848 533 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 ZNF81P51508 661 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 CLDN12P56749 244 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 GPR176Q14439 515 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 TESK1Q15569 626 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 DMRTC1Q5HYR2 192 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 UBE2NLQ5JXB2 153 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 VHLLQ6RSH7 139 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 GLIPR1L1Q6UWM5 242 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 DNM1P46Q6ZS02 220 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 LAX1Q8IWV1 398 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 MKXQ8IYA7 352 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 CMTM4Q8IZR5 234 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 MUC15Q8N387 334 aa6.9□□□□□ -1.31
NPHP3-204ENST00000469232 POC1AQ8NBT0 407 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms