RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 FAM90A16PA6NEW6 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A20PA6NIJ5 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A8PA6NJQ4 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A7PA6NKC0 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ANKRD30BLA7E2S9 258 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A22PA8MWA6 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A12PA8MX19 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A5PA8MXJ8 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A23PA8MXZ1 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 PRRG2O14669 202 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 SSX5O60225 188 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RAB3DO95716 219 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 CSTBP04080 98 aaKnown RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 CD3DP04234 171 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A15PP0C7V4 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A13PP0C7W8 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A14PP0C7W9 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 FAM90A24PP0C7X0 464 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 GLI4P10075 376 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RAC2P15153 192 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 GNB3P16520 340 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 IDH3GP51553 393 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 GNG2P59768 71 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 CD300CQ08708 224 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 PRDX4Q13162 271 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 HLXQ14774 488 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RSU1Q15404 277 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ACTBL2Q562R1 376 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 NHLRC3Q5JS37 347 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 BHLHA15Q7RTS1 189 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 TRAPPC6BQ86SZ2 158 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 NAXEQ8NCW5 288 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 HPSE2Q8WWQ2 592 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 OR5P3Q8WZ94 311 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ARHGAP5-AS1Q96IT6 56 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 HIST1H2AAQ96QV6 131 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 SLC25A21Q9BQT8 299 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 TRAF4Q9BUZ4 470 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ALX4Q9H161 411 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 OPN3Q9H1Y3 402 aaPredicted RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 PIGMQ9H3S5 423 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 POFUT1Q9H488 388 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ZMAT3Q9HA38 289 aaKnown RBP8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 MCUBQ9NWR8 336 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 GPR160Q9UJ42 338 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RAXQ9Y2V3 346 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 ACACAQ13085 2346 aa8.19□□□□□ -1.1
APOBEC1-202ENST00000467171 RTTNQ86VV8 2226 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ELOA3CA0A087WX78 387 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 IGKV1-12A0A0C4DH73 117 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 DISC1C4P0D8 188 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 H3BUI4 141 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 TPD52L2O43399 206 aaKnown RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 HTR3BO95264 441 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 IGKV1D-12P01611 117 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 CELA3BP08861 270 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF735P0CB33 412 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF35P13682 527 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 SERPINA2P20848 420 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 BLVRBP30043 206 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 OPRM1P35372 400 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 RAD52P43351 418 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 UCP2P55851 309 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 PPP1CBP62140 327 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 DMRTC1Q5HYR2 192 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 VAX1Q5SQQ9 334 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 TIMM23BQ5SRD1 257 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 METTL11BQ5VVY1 283 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 CD276Q5ZPR3 534 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ELP2Q6IA86 826 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF474Q6S9Z5 364 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF782Q6ZMW2 699 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 DOLPP1Q86YN1 238 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 CISD2Q8N5K1 135 aaKnown RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 OR10K1Q8NGX5 313 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 PECRQ9BY49 303 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 BCL2L14Q9BZR8 327 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 FGF23Q9GZV9 251 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ELL3Q9HB65 397 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 MYOZ1Q9NP98 299 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 LUZP4Q9P127 313 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 SCP2D1Q9UJQ7 156 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF221Q9UK13 617 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 ELF5Q9UKW6 265 aaPredicted RBP8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 SLC25A15Q9Y619 301 aa8.18□□□□□ -1.1
APOBEC1-202ENST00000467171 CEP295Q9C0D2 2601 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 MEIS3P1A6NDR6 274 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 SNRPGP15A8MWD9 76 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 A8MXE2 369 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 IQCF6A8MYZ5 107 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 ZNF732B4DXR9 585 aa8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 SPRY1O43609 319 aaPredicted RBP8.17□□□□□ -1.1
APOBEC1-202ENST00000467171 IL32P24001 234 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms