RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF702PQ9H963 129 aa16.69■□□□□ 0.26
COL6A1-203ENST00000466285 SF3B6Q9Y3B4 125 aaKnown RBP16.69■□□□□ 0.26
COL6A1-203ENST00000466285 NOTCH3Q9UM47 2321 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 PGA5P0DJD9 388 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 PIPP12273 146 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-203ENST00000466285 RAB13P51153 203 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 DLX6P56179 175 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 CCBE1Q6UXH8 406 aaPredicted RBP16.68■□□□□ 0.26
COL6A1-203ENST00000466285 OR4C13Q8NGP0 309 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 HIST1H2AAQ96QV6 131 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 MEGF9Q9H1U4 602 aa16.68■□□□□ 0.26
COL6A1-203ENST00000466285 NUFIP1Q9UHK0 495 aaKnown RBP16.68■□□□□ 0.26
COL6A1-203ENST00000466285 OR5B21A6NL26 309 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 F8VVB4 439 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 F8VWA3 439 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 H3BSH0 61 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 PRKYO43930 277 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 VSIG10L2P0DP72 767 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 KIR2DS4P43632 304 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 RPL31P62899 125 aaKnown RBP16.67■□□□□ 0.26
COL6A1-203ENST00000466285 BLMHQ13867 455 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 KPRPQ5T749 579 aaPredicted RBP16.67■□□□□ 0.26
COL6A1-203ENST00000466285 Q6ZPA2 131 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 TCF23Q7RTU1 214 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 OR5A2Q8NGI9 324 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 OR5D13Q8NGL4 314 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 OR5K1Q8NHB7 308 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 LRGUKQ96M69 825 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 APOL4Q9BPW4 351 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 NRIP2Q9BQI9 281 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 YIPF3Q9GZM5 350 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 TVP23BQ9NYZ1 205 aa16.67■□□□□ 0.26
COL6A1-203ENST00000466285 A0A1B0GTI1 187 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 PQLC2LA1A4F0 135 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 J3QT63 122 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 E2F6O75461 281 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 OPN1MWP04001 364 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 OPN1MW2P0DN77 364 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 OPN1MW3P0DN78 364 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 CALB2P22676 271 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 PRDX2P32119 198 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 HAAOP46952 286 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 MNAT1P51948 309 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 ROM1Q03395 351 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 RIPPLY1Q0D2K3 151 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 GK3PQ14409 553 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 TMEM42Q69YG0 159 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 Q6ZS46 218 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 Q6ZTK2 550 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 TMEM219Q86XT9 240 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 CALHM1Q8IU99 346 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 PAPD5Q8NDF8 572 aaKnown RBP16.66■□□□□ 0.26
COL6A1-203ENST00000466285 NKX3-1Q99801 234 aaPredicted RBP16.66■□□□□ 0.26
COL6A1-203ENST00000466285 THTPAQ9BU02 230 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 HES4Q9HCC6 221 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 SERTAD4Q9NUC0 356 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 OR14J1Q9UGF5 321 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 IKZF2Q9UKS7 526 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 GTF2A1LQ9UNN4 478 aa16.66■□□□□ 0.26
COL6A1-203ENST00000466285 ADARB2-AS1A8MUL3 147 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 GNGT2O14610 69 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 DHRS3O75911 302 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 HMGN1P05114 100 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 CD28P10747 220 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 EPHA2P29317 976 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 SNAPC1Q16533 368 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 SMIM21Q3B7S5 101 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 TMEM95Q3KNT9 176 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 SSX6Q7RTT6 188 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 ZNF679Q8IYX0 411 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 ZNF671Q8TAW3 534 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 ENPP5Q9UJA9 477 aa16.65■□□□□ 0.26
COL6A1-203ENST00000466285 MITFO75030 526 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-203ENST00000466285 FKBP6O75344 327 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 NRASP01111 189 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 ZNF684Q5T5D7 378 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 ASRGL1Q7L266 308 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 ANGPTL5Q86XS5 388 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 OR14K1Q8NGZ2 314 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 OR2T27Q8NH04 317 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 OR2T6Q8NHC8 308 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 BCAS4Q8TDM0 211 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 MROQ9BYG7 248 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 RANBP3Q9H6Z4 567 aaPredicted RBP16.64■□□□□ 0.25
COL6A1-203ENST00000466285 IL36RNQ9UBH0 155 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 SLC22A13Q9Y226 551 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 V9GYS6 101 aa16.64■□□□□ 0.25
COL6A1-203ENST00000466285 FAM90A8PA6NJQ4 464 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 AQP12BA6NM10 295 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 ODF3BA8MYP8 253 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 TK1P04183 234 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 DAPP51397 102 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 CXCR4P61073 352 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 ERVK11-1P61568 191 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 CBX1P83916 185 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 FAM189A2Q15884 450 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 NSUN5P1Q3KNT7 163 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 FBLN7Q53RD9 439 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 OXLD1Q5BKU9 147 aa16.63■□□□□ 0.25
COL6A1-203ENST00000466285 KCTD18Q6PI47 426 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms