RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ATMQ13315 3056 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 ACACAQ13085 2346 aa15.77■□□□□ 0.12
COL9A3-205ENST00000466192 FOXI3A8MTJ6 420 aaPredicted RBP15.77■□□□□ 0.11
COL9A3-205ENST00000466192 GOSR2O14653 212 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 OR2A4O95047 310 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 IGHV1-2P23083 117 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 CPT2P23786 658 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 GABRR1P24046 479 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 RBP2P50120 134 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 AP2S1P53680 142 aaPredicted RBP15.77■□□□□ 0.11
COL9A3-205ENST00000466192 H2BFSP57053 126 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 LGALSLQ3ZCW2 172 aaPredicted RBP15.77■□□□□ 0.11
COL9A3-205ENST00000466192 FBXW5Q969U6 566 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 BORCS8Q96FH0 119 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 OR2A7Q96R45 310 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 SLC23A1Q9UHI7 598 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 STARD10Q9Y365 291 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 BSNQ9UPA5 3926 aa15.77■□□□□ 0.11
COL9A3-205ENST00000466192 HLXQ14774 488 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-205ENST00000466192 MICBQ29980 383 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 LHFPL2Q6ZUX7 228 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 MOB3CQ70IA8 216 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 DPPA2Q7Z7J5 298 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 MDP1Q86V88 176 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 MARVELD3Q96A59 401 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF75AQ96N20 296 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 TM2D1Q9BX74 207 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 CEP295Q9C0D2 2601 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 OR2AT4A6NND4 320 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 SSTR2P30874 369 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 KIR2DL2P43627 348 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-205ENST00000466192 RAP2BP61225 183 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 TSPAN5P62079 268 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 RSU1Q15404 277 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 ACSF3Q4G176 576 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-205ENST00000466192 PLCXD3Q63HM9 321 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 C11orf88Q6PI97 169 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 FTMTQ8N4E7 242 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 RBMXL3Q8N7X1 1067 aaKnown RBP15.76■□□□□ 0.11
COL9A3-205ENST00000466192 CNEP1R1Q8N9A8 125 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 OR56B2PQ8NGI1 322 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 WNT2BQ93097 391 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 GPR137Q96N19 417 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 ST6GALNAC5Q9BVH7 336 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 PECRQ9BY49 303 aa15.76■□□□□ 0.11
COL9A3-205ENST00000466192 HTR3BO95264 441 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 CSTBP04080 98 aaKnown RBP15.75■□□□□ 0.11
COL9A3-205ENST00000466192 TBPP20226 339 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 MPZP25189 248 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 WNT5AP41221 380 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF81P51508 661 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 DHRS2Q13268 280 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ESCO2Q56NI9 601 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZBTB37Q5TC79 503 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 NANOS1Q8WY41 292 aaKnown RBP15.75■□□□□ 0.11
COL9A3-205ENST00000466192 CPNE2Q96FN4 548 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-205ENST00000466192 OCSTAMPQ9BR26 566 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 METTL9Q9H1A3 318 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 CRIM1Q9NZV1 1036 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF230Q9UIE0 474 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ANAPC10Q9UM13 185 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF850A8MQ14 1090 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF35P13682 527 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 APLNRP35414 380 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 FUT6P51993 359 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 MALLQ13021 153 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 ZMYND11Q15326 602 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 DCAF12L2Q5VW00 463 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 VWA1Q6PCB0 445 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 C6orf201Q7Z4U5 140 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 SCNM1Q9BWG6 230 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 DKK4Q9UBT3 224 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 GPR160Q9UJ42 338 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 SLC7A11Q9UPY5 501 aa15.75■□□□□ 0.11
COL9A3-205ENST00000466192 H3BUI4 141 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 NOS1APO75052 506 aaPredicted RBP15.74■□□□□ 0.11
COL9A3-205ENST00000466192 LYZL6O75951 148 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 SLC22A5O76082 557 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 HLA-AP01891 365 aaKnown RBP15.74■□□□□ 0.11
COL9A3-205ENST00000466192 SERPINA5P05154 406 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 NHLH1Q02575 133 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 FOXF2Q12947 444 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 NKAPLQ5M9Q1 402 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF585AQ6P3V2 769 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 ASCL4Q6XD76 172 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 Q6ZT83 130 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 MRPL21Q7Z2W9 205 aaKnown RBP15.74■□□□□ 0.11
COL9A3-205ENST00000466192 MAFIPQ8WZ33 124 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 ST8SIA4Q92187 359 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 Q96M66 194 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 MYOZ1Q9NP98 299 aaPredicted RBP15.74■□□□□ 0.11
COL9A3-205ENST00000466192 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL9A3-205ENST00000466192 OPN4Q9UHM6 478 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 SPEF1Q9Y4P9 236 aa15.74■□□□□ 0.11
COL9A3-205ENST00000466192 A0A1W2PR80 420 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 AHRRA9YTQ3 701 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 MYPOPQ86VE0 399 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-205ENST00000466192 C12orf45Q8N5I9 185 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-205ENST00000466192 SLC30A7Q8NEW0 376 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 TECTBQ96PL2 329 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms