RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RAB33BQ9H082 229 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 NAA60Q9H7X0 242 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 SDHAF3Q9NRP4 125 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 ALKBH4Q9NXW9 302 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 PITPNC1Q9UKF7 332 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 TP53TG5Q9Y2B4 290 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 LSM5Q9Y4Y9 91 aaKnown RBP6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 HS3ST3A1Q9Y663 406 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 MTCH2Q9Y6C9 303 aa6.33□□□□□ -1.4
CLSTN1-204ENST00000464286 MPDZO75970 2070 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 HEATR5AQ86XA9 2040 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A087WV48 116 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A0A6YYC8 382 aaPredicted RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A1W2PNV4 684 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 FTCDNL1E5RQL4 147 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 MKRN2OSH3BPM6 223 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 H3BQ15 152 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 H3BSH0 61 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 I3L1I5 382 aaPredicted RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 SLC31A1O15431 190 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 NME2P1O60361 137 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PITX3O75364 302 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 GCGP01275 180 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 IGHG1P01857 330 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 OPN1MWP04001 364 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 HEXBP07686 556 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 RNASE1P07998 156 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PGA3P0DJD8 388 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF728P0DKX0 622 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 OPN1MW2P0DN77 364 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 OPN1MW3P0DN78 364 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 OR5H8P0DN80 308 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 FOSL2P15408 326 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 RPS2P15880 293 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 S100GP29377 79 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 NTSR1P30989 418 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 CEACAM6P40199 344 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 GLIPR1P48060 266 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 UCP3P55916 312 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 SLC37A1P57057 533 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 RPS23P62266 143 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 OR8B8Q15620 311 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF124Q15973 351 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF506Q5JVG8 444 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 AADACL3Q5VUY0 350 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PLXDC2Q6UX71 529 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 FBXW12Q6X9E4 464 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 SLC16A14Q7RTX9 510 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PRSS41Q7RTY9 318 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 RD3Q7Z3Z2 195 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEFF1Q8IYR6 380 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 CARFQ8N187 725 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 SEMA6DQ8NFY4 1073 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 FAM213BQ8TBF2 198 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 CMBLQ96DG6 245 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 MRPL38Q96DV4 380 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 MARS2Q96GW9 593 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ADOQ96SZ5 270 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ST6GALNAC5Q9BVH7 336 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 ANGPTL4Q9BY76 406 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PLEKHF2Q9H8W4 249 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 CHST11Q9NPF2 352 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 SERINC1Q9NRX5 453 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 MBNL3Q9NUK0 354 aaKnown RBP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 DOK5Q9P104 306 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 HSF4Q9ULV5 492 aa6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 PUS1Q9Y606 427 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A087X0M5 115 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 TRAV1-1A0A0B4J248 108 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A1B0GX30 115 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 ANKUB1A6NFN9 424 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 VSTM2BA6NLU5 285 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 DHRS7CA6NNS2 312 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CDRT15L2A8MXV6 281 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 C9JQL5 133 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CLDN34H7C241 214 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 K7N7A8 449 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 M0QZK8 103 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 TSPAN2O60636 221 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 GGCTO75223 188 aaKnown RBP6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 SCGB1D2O95969 90 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 KNG1P01042 644 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CRYABP02511 175 aaKnown RBP6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 GLRA1P23415 457 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 GABRR1P24046 479 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CTSSP25774 331 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 LMO1P25800 156 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 BLVRBP30043 206 aaPredicted RBP6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CCKARP32238 428 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 PTGER4P35408 488 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 RPS27P42677 84 aaKnown RBP6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 DHPSP49366 369 aaPredicted RBP6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 CLRN1P58418 232 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 HERV-K104P61576 105 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 HLA-DRB3P79483 266 aa6.31□□□□□ -1.4
CLSTN1-204ENST00000464286 HSF1Q00613 529 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms