RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TMEM185AQ8NFB2 350 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 TMEM163Q8TC26 289 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 PPP1R14AQ96A00 147 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 MMP27Q9H306 513 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 ADGRL4Q9HBW9 690 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 KRT84Q9NSB2 600 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 CLN6Q9NWW5 311 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 R4GMQ9 66 aa11.74□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 RFPL4AA6NLU0 287 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 RFPL4AL1F8VTS6 287 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 H0YAE9 185 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 PGA5P0DJD9 388 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 DLX1P56177 255 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 CXCR4P61073 352 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 DEFA6Q01524 100 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 PRB3Q04118 309 aaPredicted RBP11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 EGR3Q06889 387 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 ATP6AP1Q15904 470 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 AANATQ16613 207 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 BCL2L15Q5TBC7 163 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 C12orf73Q69YU5 71 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 KDM4DQ6B0I6 523 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 ASPHD2Q6ICH7 369 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 GID4Q8IVV7 300 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 TCEANCQ8N8B7 351 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 APOL4Q9BPW4 351 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 RBM4BQ9BQ04 359 aaKnown RBP11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 NRIP2Q9BQI9 281 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 CADM1Q9BY67 442 aaKnown RBP11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 ENOPH1Q9UHY7 261 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 OR52A1Q9UKL2 312 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 POLDIP2Q9Y2S7 368 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 V9GYS6 101 aa11.73□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1B0GTI1 187 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 ZNF670-ZNF695F2Z2N8 137 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 G3V2T6 193 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 SLC1A7O00341 560 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 SYNGR1O43759 233 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 MITFO75030 526 aaPredicted RBP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 MPZP25189 248 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 PRDX2P32119 198 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 HAAOP46952 286 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 CAPZA1P52907 286 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 PDLIM3Q53GG5 364 aaPredicted RBP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 BCDIN3DQ7Z5W3 292 aaKnown RBP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 FAM185AQ8N0U4 392 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 PNKDQ8N490 385 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 OR14K1Q8NGZ2 314 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 TTTY10Q9BZA0 68 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 GABARAPL1Q9H0R8 117 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 ELL3Q9HB65 397 aaPredicted RBP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 HES4Q9HCC6 221 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 TCF7L1Q9HCS4 588 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 FAM53CQ9NYF3 392 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 MRM2Q9UI43 246 aaKnown RBP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 GTF2A1LQ9UNN4 478 aa11.72□□□□□ -0.53
SNRNP40-203ENST00000463988 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PPE2 198 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PR64 198 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 A0A1W2PRV1 198 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 CCL1P22362 96 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 FASP25445 335 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 EPHA2P29317 976 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 RPL31P62899 125 aaKnown RBP11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 BNIP1Q12981 228 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 TMEM200BQ69YZ2 307 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 CALHM1Q8IU99 346 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 PKIBQ9C010 78 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 FBLN5Q9UBX5 448 aa11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 WARS2Q9UGM6 360 aaKnown RBP11.71□□□□□ -0.53
SNRNP40-203ENST00000463988 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 M0R129 80 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 MAGEB4O15481 346 aaPredicted RBP11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 NXPH2O95156 264 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 FCGR1AP12314 374 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 RASSF2P50749 326 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 IL24Q13007 206 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 CCDC54Q8NEL0 328 aa11.7□□□□□ -0.54
SNRNP40-203ENST00000463988 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms