RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ALPPL2P10696 532 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FAHP16930 419 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 AZU1P20160 251 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MSR1P21757 451 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 LMO2P25791 158 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 BUD31P41223 144 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CDKN2AP42771 156 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FOXL2P58012 376 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TAS2R30P59541 319 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SUMO1P63165 101 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CCL20P78556 96 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 IL24Q13007 206 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TSTA3Q13630 321 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 RAB31Q13636 194 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 EXOSC7Q15024 291 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ZBTB6Q15916 424 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM241Q24JQ0 296 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ZXDCQ2QGD7 858 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM41BQ5BJD5 291 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CTSL3PQ5NE16 218 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PIP5KL1Q5T9C9 394 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 REEP3Q6NUK4 255 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SBSNQ6UWP8 590 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR2Z1Q8NG97 314 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR52R1Q8NGF1 315 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR51L1Q8NGJ5 315 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FGF11Q92914 225 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MIB2Q96AX9 1013 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CTHRC1Q96CG8 243 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 GPR146Q96CH1 333 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 POM121L2Q96KW2 1035 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 NPY6RQ99463 290 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FAM103A1Q9BTL3 118 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MED10Q9BTT4 135 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 HCAR1Q9BXC0 346 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 NMNAT2Q9BZQ4 307 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 THYN1Q9P016 225 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TBL2Q9Y4P3 447 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 LRP12Q9Y561 859 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PRSS21Q9Y6M0 314 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SCN5AQ14524 2016 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 NUP205Q92621 2012 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR2T8A6NH00 312 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR5B21A6NL26 309 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF736B4DX44 427 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SAP18O00422 153 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TAAR5O14804 337 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 B4GALT2O60909 372 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CSTBP04080 98 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PRNPP04156 253 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 C1QTNF9P0C862 333 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 STAG3L2P0CL84 134 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PI3P19957 117 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 EDNRBP24530 442 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FCGR2CP31995 323 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MC4RP32245 332 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PTGER4P35408 488 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PPICP45877 212 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SLC6A9P48067 706 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 KHKP50053 298 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ASCL1P50553 236 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SMIM11AP58511 58 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TAS2R43P59537 309 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 KRTDAPP60985 99 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 RND3P61587 244 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ARF6P62330 175 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 RAB11AP62491 216 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 HLA-DRB3P79483 266 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PSG6Q00889 435 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF92Q03936 586 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FUT5Q11128 374 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TCEA2Q15560 299 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SRSF7Q16629 238 aaKnown RBP eCLIP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF385BQ569K4 471 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FAM78AQ5JUQ0 283 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PRSS54Q6PEW0 395 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 WDR74Q6RFH5 385 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 RTN4RL2Q86UN3 420 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CALHM1Q8IU99 346 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM123Q8N131 208 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 NOXO1Q8NFA2 376 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR51D1Q8NGF3 324 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 OR51A7Q8NH64 312 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 KLK6Q92876 244 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 WBP2Q969T9 261 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 PLPPR2Q96GM1 343 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 FCRL2Q96LA5 508 aaPredicted RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ADOQ96SZ5 270 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 TIMP4Q99727 224 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MACROD1Q9BQ69 325 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 HSPB9Q9BQS6 159 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SCRT1Q9BWW7 348 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 MAGT1Q9H0U3 335 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SLC25A51Q9H1U9 297 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 CDH20Q9HBT6 801 aa3.18□□□□□ -1.9
COL8A1-205ENST00000463753 SIDT1Q9NXL6 827 aaKnown RBP3.18□□□□□ -1.9
COL8A1-205ENST00000463753 ANKRD10Q9NXR5 420 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms