RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
SKA3-204ENST00000462482 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 ABCB10Q9NRK6 738 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 AQP12BA6NM10 295 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 J3QT63 122 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 PSMD9O00233 223 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 PEX14O75381 377 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 DHRS3O75911 302 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 MRPL3P09001 348 aaKnown RBP12.52□□□□□ -0.41
SKA3-204ENST00000462482 FAHP16930 419 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 COX7A1P24310 79 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 HAAOP46952 286 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 HCCSP53701 268 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 CLVS2Q5SYC1 327 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 HCP5Q6MZN7 132 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 KRT74Q7RTS7 529 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 TRPM8Q7Z2W7 1104 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 AQP12AQ8IXF9 295 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 OR4S1Q8NGB4 309 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 C17orf50Q8WW18 174 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 NUFIP1Q9UHK0 495 aaKnown RBP12.52□□□□□ -0.41
SKA3-204ENST00000462482 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.41
SKA3-204ENST00000462482 H3BUI4 141 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 GYS2P54840 703 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 ROM1Q03395 351 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
SKA3-204ENST00000462482 DMRTC1Q5HYR2 192 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 BCL2L15Q5TBC7 163 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 OR4M1Q8NGD0 313 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 OR13D1Q8NGV5 346 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 DNAJC9Q8WXX5 260 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 FOXRED1Q96CU9 486 aaPredicted RBP12.51□□□□□ -0.41
SKA3-204ENST00000462482 OR8B4Q96RC9 309 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 CNN2Q99439 309 aaKnown RBP12.51□□□□□ -0.41
SKA3-204ENST00000462482 TEAD3Q99594 435 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 MOB1AQ9H8S9 216 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 SLC25A19Q9HC21 320 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 H2AFY2Q9P0M6 372 aaPredicted RBP12.51□□□□□ -0.41
SKA3-204ENST00000462482 OR14J1Q9UGF5 321 aa12.51□□□□□ -0.41
SKA3-204ENST00000462482 LOC110117498-PIK3R3F6TDL0 507 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 G3V4G9 280 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 PGA5P0DJD9 388 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 SLC2A5P22732 501 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 BMXP51813 675 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 EMX1Q04741 257 aaPredicted RBP12.5□□□□□ -0.41
SKA3-204ENST00000462482 FBLN7Q53RD9 439 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 TMEM236Q5W0B7 351 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 ASRGL1Q7L266 308 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 REC114Q7Z4M0 266 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 TMEM179BQ7Z7N9 219 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 SPATA24Q86W54 205 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 CD177Q8N6Q3 437 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 CFHR4Q92496 578 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 PPP1R14AQ96A00 147 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 CDCA4Q9BXL8 241 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
SKA3-204ENST00000462482 DLGAP1O14490 977 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 SYNGR1O43759 233 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 XPNPEP2O43895 674 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 FBXO24O75426 580 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 PIPP12273 146 aaPredicted RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 PRKACGP22612 351 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 FAM189A2Q15884 450 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 RPS4Y2Q8TD47 263 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 MNTQ99583 582 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 TTTY10Q9BZA0 68 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 DNAJB9Q9UBS3 223 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
SKA3-204ENST00000462482 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
SKA3-204ENST00000462482 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 FAM107AO95990 144 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 TK1P04183 234 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 ARG1P05089 322 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 CCL3L1P16619 93 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 PAX6P26367 422 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
SKA3-204ENST00000462482 CRISP1P54107 249 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 CBX1P83916 185 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 PLA1AQ53H76 456 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 ZNF322Q6U7Q0 402 aaPredicted RBP12.48□□□□□ -0.41
SKA3-204ENST00000462482 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
SKA3-204ENST00000462482 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms