RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 EBF4Q9BQW3 602 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 CCDC28BQ9BUN5 200 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 WDR13Q9H1Z4 485 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 C1orf21Q9H246 121 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 FN3KQ9H479 309 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 ZMAT4Q9H898 229 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 NRIP3Q9NQ35 241 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 RPRD1BQ9NQG5 326 aaKnown RBP4.03□□□□□ -1.76
BRCA1-206ENST00000461574 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 NLKQ9UBE8 527 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 A4GNTQ9UNA3 340 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 B9D1Q9UPM9 204 aa4.03□□□□□ -1.76
BRCA1-206ENST00000461574 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 A0A087WUU8 490 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 IGLV1-36A0A0B4J1U3 117 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 A6NDX4 124 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 TMEM210A6NLX4 147 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ZNF878C9JN71 531 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 H0YHG0 523 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 J3KTA2 159 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SLC1A7O00341 560 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 LPLP06858 475 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ACAA1P09110 424 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SPARCP09486 303 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 CFL1P23528 166 aaKnown RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 RPS27P42677 84 aaKnown RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 CX3CR1P49238 355 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ARHGDIBP52566 201 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SELENOWP63302 87 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SPIBQ01892 262 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 C9orf152Q5JTZ5 239 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ZFAND6Q6FIF0 208 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 NANOGP8Q6NSW7 305 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 TBPL2Q6SJ96 375 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SMARCD3Q6STE5 483 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 DPY19L2P2Q6ZN68 376 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 FKBP9P1Q75LS8 142 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SLC16A9Q7RTY1 509 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 DCXRQ7Z4W1 244 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ZDHHC21Q8IVQ6 265 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 CSNK2A3Q8NEV1 391 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 PROKR2Q8NFJ6 384 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 OR52H1Q8NGJ2 320 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 OR13D1Q8NGV5 346 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 OR10Z1Q8NGY1 313 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 ANGPTL6Q8NI99 470 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 NDNFQ8TB73 568 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 PIFOQ8TCI5 191 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 RPL3LQ92901 407 aaKnown RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 MALSU1Q96EH3 234 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 REEP6Q96HR9 211 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 RCHY1Q96PM5 261 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 HIST1H2AAQ96QV6 131 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 GPX7Q96SL4 187 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 NMNAT3Q96T66 252 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 IFT27Q9BW83 186 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 PNRC2Q9NPJ4 139 aaKnown RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 C19orf12Q9NSK7 152 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 USE1Q9NZ43 259 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 CYB5R1Q9UHQ9 305 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 TAGLN3Q9UI15 199 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 KCNG2Q9UJ96 466 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 SIGLEC7Q9Y286 467 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 TBL2Q9Y4P3 447 aaKnown RBP4.02□□□□□ -1.77
BRCA1-206ENST00000461574 LRP12Q9Y561 859 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 HILPDAQ9Y5L2 63 aa4.02□□□□□ -1.77
BRCA1-206ENST00000461574 GAGE12BA1L429 117 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 PSMB11A5LHX3 300 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 TVP23AA6NH52 213 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 UNC119BA6NIH7 251 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 ZNF850A8MQ14 1090 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 LY86O95711 162 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 TXNDC12O95881 172 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 APOC1P02654 83 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 H1F0P07305 194 aaKnown RBP4.01□□□□□ -1.77
BRCA1-206ENST00000461574 PIPP12273 146 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-206ENST00000461574 CCL3L1P16619 93 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 SLC6A6P31641 620 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 KDELR2P33947 212 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 SLC15A1P46059 708 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 THBS3P49746 956 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 SLC25A1P53007 311 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 MXRA7P84157 204 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 FAM3AP98173 230 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 PRDX4Q13162 271 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 IL18R1Q13478 541 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 EIF2B1Q14232 305 aaKnown RBP4.01□□□□□ -1.77
BRCA1-206ENST00000461574 IFI44LQ53G44 452 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 TCTEX1D4Q5JR98 221 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 FAM57BQ71RH2 274 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 C16orf82Q7Z2V1 217 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 KRT77Q7Z794 578 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 VTCN1Q7Z7D3 282 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 C11orf53Q8IXP5 236 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 TIGD4Q8IY51 512 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 DYNAPQ8N1N2 210 aa4.01□□□□□ -1.77
BRCA1-206ENST00000461574 MREGQ8N565 214 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms