RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF747Q9BV97 191 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ELL3Q9HB65 397 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-203ENST00000460264 TNFRSF19Q9NS68 423 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 MAB21L2Q9Y586 359 aa15.55■□□□□ 0.08
COL5A1-203ENST00000460264 ANKRD61A6NGH8 418 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 E9PQ18 207 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 NOS1APO75052 506 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-203ENST00000460264 MPZP25189 248 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 ALDH3A2P51648 485 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 ISL1P61371 349 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 ZNF85Q03923 595 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 PRB3Q04118 309 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-203ENST00000460264 PRSS35Q8N3Z0 413 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 CBR4Q8N4T8 237 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 TMEM86BQ8N661 226 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 TMEM185AQ8NFB2 350 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 SSMEM1Q8WWF3 244 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 NRIP2Q9BQI9 281 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 CHIAQ9BZP6 476 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 PLEKHA1Q9HB21 404 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL5A1-203ENST00000460264 POLDIP2Q9Y2S7 368 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 POMT1Q9Y6A1 747 aa15.54■□□□□ 0.08
COL5A1-203ENST00000460264 A0A1W2PQ09 198 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 FAM181BA6NEQ2 426 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 RFPL4AA6NLU0 287 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 RFPL4AL1F8VTS6 287 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 RNASEK-C17orf49H0YIS7 233 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 H3BSH0 61 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 SYT7O43581 403 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 ENTPD6O75354 484 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 DLX1P56177 255 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 SNRPGP62308 76 aaKnown RBP15.53■□□□□ 0.08
COL5A1-203ENST00000460264 ZIK1Q3SY52 487 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-203ENST00000460264 TP53I3Q53FA7 332 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 SLC25A30Q5SVS4 291 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 FAM220AQ7Z4H9 259 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 LDLRAD3Q86YD5 345 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 CD177Q8N6Q3 437 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 SGMS2Q8NHU3 365 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 RNF166Q96A37 237 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-203ENST00000460264 UNKLQ9H9P5 680 aaKnown RBP15.53■□□□□ 0.08
COL5A1-203ENST00000460264 GNG8Q9UK08 70 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 PKD1L1Q8TDX9 2849 aa15.53■□□□□ 0.08
COL5A1-203ENST00000460264 TRBV23-1A0A0A0MS06 115 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 M0R1W7 72 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 NXPH2O95156 264 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 OMGP23515 440 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 KIR3DL2P43630 455 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 ACTC1P68032 377 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 ACTA1P68133 377 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 GUCA2AQ02747 115 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 KLRD1Q13241 179 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 FIP1L1Q6UN15 594 aaKnown RBP15.52■□□□□ 0.08
COL5A1-203ENST00000460264 SHISA2Q6UWI4 295 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 C1orf122Q6ZSJ8 110 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 CALHM1Q8IU99 346 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 TRMT10AQ8TBZ6 339 aaKnown RBP15.52■□□□□ 0.08
COL5A1-203ENST00000460264 NPRL2Q8WTW4 380 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 TNFRSF14Q92956 283 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 MBOAT4Q96T53 435 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 HES4Q9HCC6 221 aa15.52■□□□□ 0.08
COL5A1-203ENST00000460264 MGAM2Q2M2H8 2515 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 LOC107986453A0A1B0GWG9 222 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 J3QRE1 110 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 IGHV4-59P01825 116 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 UBCP0CG48 685 aaKnown RBP15.51■□□□□ 0.07
COL5A1-203ENST00000460264 MDKP21741 143 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-203ENST00000460264 CEBPDP49716 269 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-203ENST00000460264 UBE2V2Q15819 145 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 OCLNQ16625 522 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 MEDAGQ5VYS4 303 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 BATF2Q8N1L9 274 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 ZNF561Q8N587 486 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 CCDC54Q8NEL0 328 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 TBC1D15Q8TC07 691 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 RNFT2Q96EX2 444 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 PKIBQ9C010 78 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 CHST5Q9GZS9 411 aa15.51■□□□□ 0.07
COL5A1-203ENST00000460264 METTL8Q9H825 291 aaKnown RBP15.51■□□□□ 0.07
COL5A1-203ENST00000460264 FAM230AA0A1W2PPH8 454 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 POM121CA8CG34 1229 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 SLC1A7O00341 560 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 NPFFO15130 113 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 GATBO75879 557 aaKnown RBP15.5■□□□□ 0.07
COL5A1-203ENST00000460264 EEF1B2P24534 225 aaKnown RBP15.5■□□□□ 0.07
COL5A1-203ENST00000460264 PRDX2P32119 198 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 IER3P46695 156 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 CAPZA1P52907 286 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 ERVK11-1P61568 191 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 IL24Q13007 206 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 NCR3LG1Q68D85 454 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 ANGPTL5Q86XS5 388 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 C10orf67Q8IYJ2 551 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 ADI1Q9BV57 179 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 C19orf12Q9NSK7 152 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 SLC7A11Q9UPY5 501 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 FAM96BQ9Y3D0 163 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 MMP24Q9Y5R2 645 aa15.5■□□□□ 0.07
COL5A1-203ENST00000460264 DSCAML1Q8TD84 2053 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms