RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SF3A3Q12874 501 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 KRT72Q14CN4 511 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 ABCA11PQ4W5N1 156 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 KLHL22Q53GT1 634 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 HAGHLQ6PII5 290 aaPredicted RBP13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 OR6K6Q8NGW6 343 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 ZNF671Q8TAW3 534 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 GNPDA2Q8TDQ7 276 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 C1orf21Q9H246 121 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 IL20Q9NYY1 176 aa13.66□□□□□ -0.22
UBE2D4-209ENST00000454428 RBP4P02753 201 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 ZNF728P0DKX0 622 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 DYNC1I2Q13409 638 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 SMIM21Q3B7S5 101 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 MINOS1Q5TGZ0 78 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 CGB2Q6NT52 195 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 C16orf82Q7Z2V1 217 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 OR8B12Q8NGG6 310 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 ZNF649Q9BS31 505 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 LIN7BQ9HAP6 207 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 TBC1D23Q9NUY8 699 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 MRGBPQ9NV56 204 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 MINOS1-NBL1R4GNA1 71 aa13.65□□□□□ -0.22
UBE2D4-209ENST00000454428 PGA5P0DJD9 388 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 SMIM11AP58511 58 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 OR6N2Q8NGY6 317 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 OR4Q3Q8NH05 313 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 HIST1H2AAQ96QV6 131 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 PRR25Q96S07 402 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 P2RX4Q99571 388 aa13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
UBE2D4-209ENST00000454428 SLC22A2O15244 555 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 H2BFMP0C1H6 154 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ACTA2P62736 377 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ACTG2P63267 376 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ACTC1P68032 377 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ACTA1P68133 377 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 GLYATQ6IB77 296 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 UNQ9370/PRO34162Q6UXP9 181 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 C8orf86Q6ZUL3 223 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ERI1Q8IV48 349 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 BATF2Q8N1L9 274 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 OSR2Q8N2R0 312 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 OR9Q2Q8NGE9 314 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 OR52L1Q8NGH7 329 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 OR5A2Q8NGI9 324 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 BCAS4Q8TDM0 211 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 INTS14Q96SY0 518 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 HOPXQ9BPY8 73 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 BTBD10Q9BSF8 475 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 HES4Q9HCC6 221 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 ABCD2Q9UBJ2 740 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 V9GYQ6 96 aa13.63□□□□□ -0.23
UBE2D4-209ENST00000454428 IGHV2-26A0A0B4J1V2 119 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 OR5B21A6NL26 309 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 K7N7A8 449 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 NOS1APO75052 506 aaPredicted RBP13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 RRM2P31350 389 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 IFNGR2P38484 337 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 RPL13AP3Q6NVV1 102 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 OR2W3Q7Z3T1 314 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 OR4P4Q8NGL7 312 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 NRIP2Q9BQI9 281 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 SLC25A33Q9BSK2 321 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 MED20Q9H944 212 aa13.62□□□□□ -0.23
UBE2D4-209ENST00000454428 RAMP3O60896 148 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 ZNF737O75373 536 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 OR2F2O95006 317 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 PSMA6P60900 246 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 NDNFQ8TB73 568 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 VIPAS39Q9H9C1 493 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 OR14J1Q9UGF5 321 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 KLHDC2Q9Y2U9 406 aa13.61□□□□□ -0.23
UBE2D4-209ENST00000454428 PSMB11A5LHX3 300 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 COX4I1P13073 169 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 GSTT1P30711 240 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 MYCNOSP40205 109 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 MAP2K3P46734 347 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 BLVRAP53004 296 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 RASSF6Q6ZTQ3 369 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 MOB3CQ70IA8 216 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 PYURFQ96I23 114 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 AKR1E2Q96JD6 320 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 TSSK6Q9BXA6 273 aa13.6□□□□□ -0.23
UBE2D4-209ENST00000454428 ZMAT5Q9UDW3 170 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms