RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 SPSB3Q6PJ21 355 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SPNS3Q6ZMD2 512 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 DGAT2L6Q6ZPD8 337 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 Q7L0L9 218 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 KCTD9Q7L273 389 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 DPY19L4Q7Z388 723 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 C5orf24Q7Z6I8 188 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FAM219AQ8IW50 185 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 GVQW1Q8N7I0 195 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FRMD1Q8N878 549 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 LFNGQ8NES3 379 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR5L2Q8NGL0 311 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR6N2Q8NGY6 317 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 AKR7LQ8NHP1 331 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ZNF519Q8TB69 540 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SSC4DQ8WTU2 575 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CASTOR1Q8WTX7 329 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TSEN15Q8WW01 171 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SMARCD2Q92925 531 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BHQ93079 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FAM46BQ96A09 425 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 KTI12Q96EK9 354 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 MVB12AQ96EY5 273 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SLC25A44Q96H78 314 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 LPAR4Q99677 370 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BNQ99877 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HIST1H2BMQ99879 126 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 NDUFAF3Q9BU61 184 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 MRPL37Q9BZE1 423 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 LMAN2LQ9H0V9 348 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SLC35B3Q9H1N7 401 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SRMSQ9H3Y6 488 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ELOVL3Q9HB03 270 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 PLEKHA2Q9HB19 425 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SPACA1Q9HBV2 294 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 WFDC1Q9HC57 220 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 Q9N2J8 555 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SIRT7Q9NRC8 400 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FBXL17Q9UF56 701 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 IKZF2Q9UKS7 526 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 ZDHHC8Q9ULC8 765 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CA14Q9ULX7 337 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 B9D1Q9UPM9 204 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 DHDHQ9UQ10 334 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FARSAQ9Y285 508 aaKnown RBP3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR1A2Q9Y585 309 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 CLDN16Q9Y5I7 305 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 HS3ST3B1Q9Y662 390 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 WNT6Q9Y6F9 365 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 R4GMQ9 66 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 NOTCH4Q99466 2003 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 TRPM6Q9BX84 2022 aa3.61□□□□□ -1.83
HMGB3P22-202ENST00000451823 SCN5AQ14524 2016 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 A0A087X0M5 115 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 EDDM13A0A1B0GTR0 161 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 A0A1B0GX30 115 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR5H15A6NDH6 313 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 BTBD17A6NE02 478 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR5H1A6NKK0 313 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 VWC2LB2RUY7 222 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 C9J4A7 227 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CLDN4O14493 209 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 DVL1O14640 695 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 ADAM10O14672 748 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 HSD17B6O14756 317 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 AGPAT2O15120 278 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 RRP8O43159 456 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 ZNF354AO60765 605 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 OR2C1O95371 312 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 RENP00797 406 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CRYABP02511 175 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CLPSP04118 112 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 SRP19P09132 144 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CXCL1P09341 107 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CT45A8P0DMV1 189 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 CT45A9P0DMV2 189 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 COX5BP10606 129 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 MYOGP15173 224 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 FOSL2P15408 326 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 TMEM11P17152 192 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 AKR1C4P17516 323 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 S100A2P29034 98 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 RPL12P30050 165 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 TLX1P31314 330 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 FCGR2CP31995 323 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 PTGER4P35408 488 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 GRK6P43250 576 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 P2RY1P47900 373 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 GABRA4P48169 554 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 NPY4RP50391 375 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 NDUFA6P56556 154 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 TMEM50BP56557 158 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 TMEM33P57088 247 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 RAB38P57729 211 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 TFF2Q03403 129 aa3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 RPL18Q07020 188 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 EIF3IQ13347 325 aaKnown RBP3.6□□□□□ -1.83
HMGB3P22-202ENST00000451823 EIF2B1Q14232 305 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms