RNA–Protein interactions for RNA: ENST00000450966.5

USP40-208, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP40, Length 5,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-208ENST00000450966 SLC25A34Q6PIV7 304 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PIANPQ8IYJ0 282 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 RBMXL3Q8N7X1 1067 aaKnown RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 CADM4Q8NFZ8 388 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 MRPL37Q9BZE1 423 aaKnown RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 TRAPPC2LH3BP13 241 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PGA3P0DJD8 388 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 P2RY1P47900 373 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 EGR3Q06889 387 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 MYPOPQ86VE0 399 aaPredicted RBP11.94□□□□□ -0.5
USP40-208ENST00000450966 ARHGEF39Q8N4T4 335 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 SLC6A18Q96N87 628 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PMCHL2Q9BQD1 86 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 CA10Q9NS85 328 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 PPT2Q9UMR5 302 aa11.94□□□□□ -0.5
USP40-208ENST00000450966 MRPL33O75394 65 aaKnown RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 CPMP14384 443 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 OR1L6Q8NGR2 347 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 CITED1Q99966 193 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 CDC42EP3Q9UKI2 254 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 FAM24AA6NFZ4 105 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 CD14P08571 375 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 SLC25A6P12236 298 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP40-208ENST00000450966 PAQR9Q6ZVX9 377 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 KCNJ15Q99712 375 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 ULBP2Q9BZM5 246 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 P2RY12Q9H244 342 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 ZNF107Q9UII5 783 aaPredicted RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 HMGA1P17096 107 aaKnown RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 PTGER4P35408 488 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 CSNK1G2P78368 415 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 PLCXD3Q63HM9 321 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 NPSR1Q6W5P4 371 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
USP40-208ENST00000450966 TUBA4BQ9H853 241 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 NPBWR2P48146 333 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 WNT7BP56706 349 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 TRA2AQ13595 282 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP40-208ENST00000450966 C6orf201Q7Z4U5 140 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 GON4LQ3T8J9 2241 aa11.93□□□□□ -0.5
USP40-208ENST00000450966 CBR3O75828 277 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 WNT11O96014 354 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 HTR1DP28221 377 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 IL2RGP31785 369 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 DPTQ07507 201 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 Q56UQ5 140 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 OR11H4Q8NGC9 324 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 RGP1Q92546 391 aaPredicted RBP11.92□□□□□ -0.5
USP40-208ENST00000450966 ADAT3Q96EY9 351 aaPredicted RBP11.92□□□□□ -0.5
USP40-208ENST00000450966 OR6C1Q96RD1 312 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 STACQ99469 402 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 PIPOXQ9P0Z9 390 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 C2CD4DB7Z1M9 353 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 DOK2O60496 412 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 HLA-DQB1P01920 261 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 CT45A10P0DMU9 189 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 FBLN7Q53RD9 439 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 Q5BKY6 102 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
USP40-208ENST00000450966 MBNL1Q9NR56 388 aaKnown RBP11.92□□□□□ -0.5
USP40-208ENST00000450966 SHISA7A6NL88 538 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 TARM1B6A8C7 271 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 SDCBPO00560 298 aaPredicted RBP11.92□□□□□ -0.5
USP40-208ENST00000450966 PMP22Q01453 160 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 ZNF880Q6PDB4 577 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 FAM57BQ71RH2 274 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 MRGPRGQ86SM5 289 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 EID2BQ96D98 161 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 SIRT5Q9NXA8 310 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 HSD17B6O14756 317 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 ZNF749O43361 778 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 GNG7O60262 68 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 GYPAP02724 150 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 ST6GAL1P15907 406 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 OR1D4P47884 311 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 ASCL1P50553 236 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 C9orf50Q5SZB4 431 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 OR2C3Q8N628 320 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 JAM3Q9BX67 310 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 FGF21Q9NSA1 209 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 SSC5DA1L4H1 1573 aa11.92□□□□□ -0.5
USP40-208ENST00000450966 A0A1B0GX78 115 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms