RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 IQCF6A8MYZ5 107 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 ZNF732B4DXR9 585 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 HTR3BO95264 441 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 CA6P23280 308 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 GIFP27352 417 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 CALCRP30988 508 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 ZNF83P51522 516 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 NAAAQ02083 359 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 PSG7Q13046 419 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 SAXO1Q8IYX7 474 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 RELL2Q8NC24 303 aaPredicted RBP12.22□□□□□ -0.45
USP39-207ENST00000450066 MEMO1Q9Y316 297 aa12.22□□□□□ -0.45
USP39-207ENST00000450066 TRGV8A0A0C4DH27 118 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 MEIS3P1A6NDR6 274 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 C16orf97H3BN30 126 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 FAUP35544 74 aaKnown RBP12.21□□□□□ -0.45
USP39-207ENST00000450066 HAAOP46952 286 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 TMEM255AQ5JRV8 349 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 RSBN1Q5VWQ0 802 aaPredicted RBP12.21□□□□□ -0.45
USP39-207ENST00000450066 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 FJX1Q86VR8 437 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 PPP1R14BQ96C90 147 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP39-207ENST00000450066 KCNK7Q9Y2U2 307 aa12.21□□□□□ -0.45
USP39-207ENST00000450066 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
USP39-207ENST00000450066 MFNGO00587 321 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 AKR7A2O43488 359 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 TCRBP04435 133 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
USP39-207ENST00000450066 CA7P43166 264 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 GNG3P63215 75 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 PNLIPRP3Q17RR3 467 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 TMEM200AQ86VY9 491 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 OSR2Q8N2R0 312 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 Q8NFD4 153 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 DVL3Q92997 716 aaPredicted RBP12.2□□□□□ -0.46
USP39-207ENST00000450066 NPAP1Q9NZP6 1156 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 NUBP2Q9Y5Y2 271 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 M0R1B8 84 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 CYB5AP00167 134 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 SFTPBP07988 381 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 AKAIN1P0CW23 69 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 CCKARP32238 428 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 MPV17P39210 176 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 CCR6P51684 374 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 TAS2R19P59542 299 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 AGAP6Q5VW22 663 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 ZNF573Q86YE8 665 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 TMEM229BQ8NBD8 167 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 NUDCD2Q8WVJ2 157 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 POM121Q96HA1 1249 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 NEURL2Q9BR09 285 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
USP39-207ENST00000450066 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 CRYAAP02489 173 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 CD3DP04234 171 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 KITLGP21583 273 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 RCVRNP35243 200 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 GNG2P59768 71 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 BTG1P62324 171 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 LY6DQ14210 128 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 MBNL2Q5VZF2 373 aaKnown RBP12.19□□□□□ -0.46
USP39-207ENST00000450066 SFRP4Q6FHJ7 346 aaPredicted RBP12.19□□□□□ -0.46
USP39-207ENST00000450066 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 RTN4RL2Q86UN3 420 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 MKXQ8IYA7 352 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 OR4C16Q8NGL9 310 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 OR8S1Q8NH09 359 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 CHAC2Q8WUX2 184 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 RTL8AQ9BWD3 113 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 OR10A4Q9H209 315 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 MCUBQ9NWR8 336 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 POLEQ07864 2286 aa12.19□□□□□ -0.46
USP39-207ENST00000450066 A0A0B4J293 547 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 SERPINE3A8MV23 424 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ERVH48-1M5A8F1 160 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 SSX5O60225 188 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 GABRR1P24046 479 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 TATDN3Q17R31 274 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ALKBH6Q3KRA9 238 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 FAM76BQ5HYJ3 339 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ELP2Q6IA86 826 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 SEZ6L2Q6UXD5 910 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 FBXL14Q8N1E6 418 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 PECRQ9BY49 303 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 OR51I2Q9H344 312 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 PURGQ9UJV8 347 aaKnown RBP12.18□□□□□ -0.46
USP39-207ENST00000450066 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
USP39-207ENST00000450066 ZNF736B4DX44 427 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms