RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 AQP4P55087 323 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 SLC36A1Q7Z2H8 476 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 SGMS2Q8NHU3 365 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 ZNF671Q8TAW3 534 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 HAVCR2Q8TDQ0 301 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 TSEN15Q8WW01 171 aaKnown RBP12.11□□□□□ -0.47
USP39-206ENST00000448971 PP6455Q8WZ26 134 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 ST8SIA4Q92187 359 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 AQP3Q92482 292 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 TMIGD2Q96BF3 282 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 C10orf35Q96D05 121 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 BORCS8Q96FH0 119 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 CCL13Q99616 98 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 JAM3Q9BX67 310 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 SMURF1Q9HCE7 757 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 NLKQ9UBE8 527 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 DIMT1Q9UNQ2 313 aaKnown RBP12.11□□□□□ -0.47
USP39-206ENST00000448971 EXOSC1Q9Y3B2 195 aaKnown RBP12.11□□□□□ -0.47
USP39-206ENST00000448971 AUP1Q9Y679 476 aa12.11□□□□□ -0.47
USP39-206ENST00000448971 A0A1B0GW55 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 TMEM212A6NML5 194 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 SYNGR1O43759 233 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 ENSAO43768 121 aaKnown RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 PLATP00750 562 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 ISG15P05161 165 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L2P0CJ85 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L3P0CJ86 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L4P0CJ87 422 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L5P0CJ88 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L6P0CJ89 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L7P0CJ90 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 ETV1P50549 477 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 IKZF1Q13422 519 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 OR2G6Q5TZ20 316 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 STUMQ69YW2 141 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4L9Q6RFH8 374 aaPredicted RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 ZNF841Q6ZN19 808 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 AHSA2Q719I0 299 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 BATF2Q8N1L9 274 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 OR10AC1Q8NH08 325 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 NANPQ8TBE9 248 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 FAM216AQ8WUB2 273 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 NRG4Q8WWG1 115 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 RAB40AQ8WXH6 277 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 TMEM80Q96HE8 168 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 ZNF649Q9BS31 505 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 DUX4Q9UBX2 424 aa12.1□□□□□ -0.47
USP39-206ENST00000448971 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
USP39-206ENST00000448971 TRBV2A0A0J9YWF9 115 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 C22orf46C9J442 243 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 E9PI62 339 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 DVL1O14640 695 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 NDUFB3O43676 98 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 XPNPEP2O43895 674 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 PIPP12273 146 aaPredicted RBP12.09□□□□□ -0.47
USP39-206ENST00000448971 EPHA1P21709 976 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 GABRA2P47869 451 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 CD276Q5ZPR3 534 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 USP43Q70EL4 1123 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 EGFL6Q8IUX8 553 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 STX19Q8N4C7 294 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 C3orf56Q8N813 242 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 POC1AQ8NBT0 407 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 OR51A4Q8NGJ6 313 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 TFAP2CQ92754 450 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 GCDHQ92947 438 aaPredicted RBP12.09□□□□□ -0.47
USP39-206ENST00000448971 FGGYQ96C11 551 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 PDCD1LG2Q9BQ51 273 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 RASSF4Q9H2L5 321 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 KAAG1Q9UBP8 84 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 OPN4Q9UHM6 478 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
USP39-206ENST00000448971 OR2AT4A6NND4 320 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 MYL12BO14950 172 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 NXPH2O95156 264 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 ZFPL1O95159 310 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 TFF1P04155 84 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 AZGP1P25311 298 aaKnown RBP12.08□□□□□ -0.48
USP39-206ENST00000448971 TGM4P49221 684 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 POU3F4P49335 361 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 FUT6P51993 359 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
USP39-206ENST00000448971 HILS1P60008 231 aa12.08□□□□□ -0.48
USP39-206ENST00000448971 IL13RA1P78552 427 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms