RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ANKRD33Q7Z3H0 272 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ETFBKMTQ8IXQ9 262 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PRO1933Q9H354 126 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ATP23Q9Y6H3 246 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 SHROOM3Q8TF72 1996 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 M0R1X1 148 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 MYOGP15173 224 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 SDHBP21912 280 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 SELENOPP49908 381 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 HTRA3P83110 453 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF117Q03924 483 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 JMJD6Q6NYC1 403 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF275Q9NSD4 429 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 LPAR3Q9UBY5 353 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 ERRFI1Q9UJM3 462 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 V9GYH0 126 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PRRG2O14669 202 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 IGHA1P01876 353 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 OPN1MWP04001 364 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 CST2P09228 141 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 CDKN2AP42771 156 aaKnown RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM267Q0VDI3 215 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PMS2P11Q13670 270 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 INPP5JQ15735 1006 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-204ENST00000448183 PWWP2BQ6NUJ5 590 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 SEZ6L2Q6UXD5 910 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 SLC16A13Q7RTY0 426 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 MRGPREQ86SM8 312 aa6.95□□□□□ -1.3
NEDD9-204ENST00000448183 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 A0A1B0GTH9 108 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OR5H15A6NDH6 313 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OR5H1A6NKK0 313 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 RER1O15258 196 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 PDCD6O75340 191 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 PTBP3O95758 552 aaKnown RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM33P57088 247 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 DHRS7BQ6IAN0 325 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C9orf62Q8N4C0 152 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OR2T6Q8NHC8 308 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF707Q96C28 371 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TRAF4Q9BUZ4 470 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SIRT3Q9NTG7 399 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SPTY2D1-AS1A0A0U1RR47 76 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TEX50A0A1B0GTY4 177 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 FCN1O00602 326 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CDC42EP2O14613 210 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 HEXAP06865 529 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF250P15622 560 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CCR2P41597 374 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C21orf58P58505 322 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 AMER3Q8N944 861 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 BCL2L2Q92843 193 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 FAAP24Q9BTP7 215 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 WDR61Q9GZS3 305 aaKnown RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SLC45A2Q9UMX9 530 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 RNF24Q9Y225 148 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 A0A1B0GUL6 1792 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ELOA3CA0A087WX78 387 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 DUXBA0A1W2PPF3 345 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SLC22A20A6NK97 555 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 LMO7DNF2Z398 122 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CDC14BO60729 498 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF737O75373 536 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 HRASP01112 189 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CXCL3P19876 107 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SPCS3P61009 180 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C17orf78Q8N4C9 275 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OR6S1Q8NH40 331 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TSPAN32Q96QS1 320 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 LRFN3Q9BTN0 628 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 H3BMH7 237 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 LINC01387J3KSC0 135 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TCAPO15273 167 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ADAP1O75689 374 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 NGFP01138 241 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 GYPAP02724 150 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CRHP06850 196 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OR5AC1P0C628 307 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF154Q13106 437 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 SURF2Q15527 256 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 AWAT1Q58HT5 328 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 TIPARPQ7Z3E1 657 aaKnown RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 MYPOPQ86VE0 399 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 C20orf196Q8IYI0 205 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 FGF14Q92915 247 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 NEIL1Q96FI4 390 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CNTD2Q9H8S5 307 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 CACNG5Q9UF02 275 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 OPN4Q9UHM6 478 aa6.94□□□□□ -1.3
NEDD9-204ENST00000448183 MYH14Q7Z406 1995 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms