RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ELL3Q9HB65 397 aaPredicted RBP6.41□□□□□ -1.38
CDC42BPA-208ENST00000442054 DBX1A6NMT0 343 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANXA2P2A6NMY6 339 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 SS18L1O75177 396 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 H2BFMP0C1H6 154 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 HNF1AP20823 631 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 MFGE8Q08431 387 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 SPATA46Q5T0L3 261 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF474Q6S9Z5 364 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR5AK2Q8NH90 309 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 GPR148Q8TDV2 347 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPS24Q96EL2 167 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 PGAM5Q96HS1 289 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR8B4Q96RC9 309 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 MS4A5Q9H3V2 200 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 YAE1D1Q9NRH1 226 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 SDHAF2Q9NX18 166 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC2A8Q9NY64 477 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 WNK2Q9Y3S1 2297 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 F8P00451 2351 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 KIAA1549Q9HCM3 1950 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 TVP23AA6NH52 213 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 TMEM212A6NML5 194 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC17A2O00624 439 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 ISG15P05161 165 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 C1orf100Q5SVJ3 147 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 TMUB2Q71RG4 321 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 HSD17B13Q7Z5P4 300 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 BVESQ8NE79 360 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR2AK2Q8NG84 335 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 AKR7LQ8NHP1 331 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 PLSCR4Q9NRQ2 329 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF107Q9UII5 783 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 TIMM10BQ9Y5J6 103 aa6.4□□□□□ -1.38
CDC42BPA-208ENST00000442054 IGLV3-32A0A0A0MS00 114 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 SGCEO43556 437 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 SPRY3O43610 288 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 CD99P14209 185 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 MSR1P21757 451 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 LAP3P28838 519 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 INPP1P49441 399 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM69Q5SWH9 247 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 LILRB2Q8N423 598 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 BHLHE23Q8NDY6 225 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 ST7LQ8TDW4 575 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 AQP3Q92482 292 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 NTNG2Q96CW9 530 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 S100A16Q96FQ6 103 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 BOD1Q96IK1 185 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 GPR35Q9HC97 309 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 SH2D2AQ9NP31 389 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCNG2Q9UJ96 466 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 MAB21L2Q9Y586 359 aa6.4□□□□□ -1.39
CDC42BPA-208ENST00000442054 IGHV3-64DA0A0J9YX35 117 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 RNF222A6NCQ9 220 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SNAPC5O75971 98 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CLDN1O95832 211 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 APOC1P02654 83 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF273Q14593 569 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC17A1Q14916 467 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 RBMS2Q15434 407 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 C10orf91Q5T1B1 145 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LRFN4Q6PJG9 635 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 MOB3CQ70IA8 216 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 GGNQ86UU5 652 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC30A7Q8NEW0 376 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CYYR1Q96J86 154 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 C1orf147Q96MC9 270 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 S100A13Q99584 98 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 GAL3ST1Q99999 423 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LPAR2Q9HBW0 351 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CENPEQ02224 2701 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 RAMP1O60894 148 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CYB5AP00167 134 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CCL2P13500 99 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 S100A11P31949 105 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CDAP32320 146 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 RPS27P42677 84 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 C2orf76Q3KRA6 126 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 MOGAT2Q3SYC2 334 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 THEM4Q5T1C6 240 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR5AS1Q8N127 324 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SCARB1Q8WTV0 552 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 PTX4Q96A99 478 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LURAP1Q96LR2 239 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 TXNIPQ9H3M7 391 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LAMP5Q9UJQ1 280 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 B9D1Q9UPM9 204 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 MRPS7Q9Y2R9 242 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 DMXL2Q8TDJ6 3036 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CEACAM18A8MTB9 384 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 FOXI3A8MTJ6 420 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 DNASE2O00115 360 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CD40P25942 277 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SERPINF1P36955 418 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 AP3S2P59780 193 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 TSPAN5P62079 268 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms