RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 BTCP35070 178 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RCVRNP35243 200 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PTGDSP41222 190 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 EIF1P41567 113 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RPS27P42677 84 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 DNASE1L1P49184 302 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CCR6P51684 374 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 BIDP55957 195 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CLDN12P56749 244 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GLO1Q04760 184 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FOXF1Q12946 379 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TNK1Q13470 666 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRA2AQ13595 282 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FCN2Q15485 313 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RAB11BQ15907 218 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ODF4Q2M2E3 257 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PAPPA-AS1Q5QFB9 102 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM69Q5SWH9 247 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 THEM4Q5T1C6 240 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 BCL2L15Q5TBC7 163 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM244Q5VVB8 128 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GLT8D1Q68CQ7 371 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR7E24Q6IFN5 339 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM53Q6P2H8 277 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 DEGS2Q6QHC5 323 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ARSKQ6UWY0 536 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FOXL2NBQ6ZUU3 175 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 Q75L30 129 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 LUZP2Q86TE4 346 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMPRSS12Q86WS5 348 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CATSPERDQ86XM0 798 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PLCZ1Q86YW0 608 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 SERPINA12Q8IW75 414 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 KDM8Q8N371 416 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ARL6IP6Q8N6S5 226 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ASCC1Q8N9N2 400 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR4K17Q8NGC6 315 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR52N5Q8NH56 324 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR52I2Q8NH67 350 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR56B4Q8NH76 319 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZFAND1Q8TCF1 268 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 MCHR2Q969V1 340 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM106AQ96A25 262 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PHF21AQ96BD5 680 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HAVCR1Q96D42 359 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 SNRNP40Q96DI7 357 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC25A38Q96DW6 304 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RNF170Q96K19 258 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HYLS1Q96M11 299 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FOXN4Q96NZ1 517 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CMKLR1Q99788 373 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM246Q9BRR3 403 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GTPBP2Q9BX10 602 aaKnown RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 GON7Q9BXV9 100 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 BEX2Q9BXY8 128 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ULBP3Q9BZM4 244 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR51J1Q9H342 316 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PTGES2Q9H7Z7 377 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 METTL7AQ9H8H3 244 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 WDR54Q9H977 334 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 APMAPQ9HDC9 416 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HRASLSQ9HDD0 168 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FANCFQ9NPI8 374 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 DIABLOQ9NR28 239 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC17A5Q9NRA2 495 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 NUDT15Q9NV35 164 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 MCUBQ9NWR8 336 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 HPF1Q9NWY4 346 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PAQR5Q9NXK6 330 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 EMC3Q9P0I2 261 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CKLFQ9UBR5 152 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PISDQ9UG56 409 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF222Q9UK12 451 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 FBXL2Q9UKC9 423 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR52A1Q9UKL2 312 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC22A13Q9Y226 551 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 RPH3AQ9Y2J0 694 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 R4GMQ9 66 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 PDE4DIPQ5VU43 2346 aa2.96□□□□□ -1.94
HMGB3P11-201ENST00000440127 CCDC88CQ9P219 2028 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 SNRNP200O75643 2136 aaKnown RBP2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRAV18A0A075B6X5 111 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A087WZY1 265 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 IGHV1-45A0A0A0MS14 117 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1B0GVI7 797 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM269A0A1B0GVZ9 245 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1W2PNV4 684 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A1W2PS18 150 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 ANKRD20A5PA0PJZ0 165 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF726A6NNF4 738 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 C9J4A7 227 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 H0YC42 278 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 H3BSH0 61 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 SULT2B1O00204 365 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC17A2O00624 439 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 NTN3O00634 580 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 HS3ST1O14792 307 aa2.95□□□□□ -1.94
HMGB3P11-201ENST00000440127 SSNA1O43805 119 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms