RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC38A9Q8NBW4 561 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 ASB10Q8WXI3 467 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 MR1Q95460 341 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 DOK5Q9P104 306 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 RBM7Q9Y580 266 aaKnown RBP7.99□□□□□ -1.13
COPB1-202ENST00000439561 RFNGQ9Y644 331 aa7.99□□□□□ -1.13
COPB1-202ENST00000439561 FANCMQ8IYD8 2048 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 OBSL1O75147 1896 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 NSG1A0A0A6YYJ2 146 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 A6NCN8 305 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 TMEM14DPA8MWL7 114 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 PRAMEF26H0Y7S4 382 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 DXOO77932 396 aaKnown RBP7.98□□□□□ -1.13
COPB1-202ENST00000439561 CD5P06127 495 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 FOSL1P15407 271 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 YPEL5P62699 121 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 VAX1Q5SQQ9 334 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 TMEM268Q5VZI3 342 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 SLC22A25Q6T423 547 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 C9orf40Q8IXQ3 194 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 NECAP1Q8NC96 275 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 PLPP5Q8NEB5 264 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 LIPHQ8WWY8 451 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 SYT3Q9BQG1 590 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 FAM206AQ9NX38 181 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 A0A1W2PQF6 199 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 SMCO3A2RU48 225 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 RAMP1O60894 148 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 DEDDO75618 318 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 MBPP02686 304 aaPredicted RBP7.98□□□□□ -1.13
COPB1-202ENST00000439561 ISG15P05161 165 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 PRF1P14222 555 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 FOLR1P15328 257 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 CLDN17P56750 224 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 MFAP5Q13361 173 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 PRAMEF20Q5VT98 475 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 CA5BP1Q8WTZ4 195 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 PECRQ9BY49 303 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 POMT1Q9Y6A1 747 aa7.98□□□□□ -1.13
COPB1-202ENST00000439561 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 DHRS7CA6NNS2 312 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 H3BQ15 152 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 GATCO43716 136 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 MYF5P13349 255 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 CTHP32929 405 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 MRPS34P82930 218 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 DOK3Q7L591 496 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 ZNF429Q86V71 674 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 LURAP1Q96LR2 239 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 SRPK3Q9UPE1 567 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 CDH23Q9H251 3354 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 TRBV6-7A0A0A0MS04 114 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 OR7C1O76099 320 aaPredicted RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 TRGC2P03986 189 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 GUSBP08236 651 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 AGAP20933 346 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 DCAF7P61962 342 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 RPS18P62269 152 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 RAB1AP62820 205 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 C10orf91Q5T1B1 145 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 DEGS2Q6QHC5 323 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 SLC22A18ASQ8N1D0 253 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 OR11L1Q8NGX0 322 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 RAB39BQ96DA2 213 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 POM121Q96HA1 1249 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 GPHA2Q96T91 129 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 WBP1LQ9NX94 342 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 TGIF2-C20orf24A0A0A6YYL0 155 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 GPR137BO60478 399 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 LCATP04180 440 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 ZNF16P17020 682 aaPredicted RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 CCNOP22674 350 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 FCARP24071 287 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 DUSP1P28562 367 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 TNFRSF4P43489 277 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 CSNK1EP49674 416 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 NOVA1P51513 510 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 IDH3GP51553 393 aaPredicted RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 DLK1P80370 383 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 FAM3AP98173 230 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 MYBPHQ13203 477 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 FNDC7Q5VTL7 733 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 LCN15Q6UWW0 184 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 TMEM92Q6UXU6 159 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 LGI3Q8N145 548 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 INTS12Q96CB8 462 aaKnown RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 ZDHHC12Q96GR4 267 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 SNX22Q96L94 193 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
COPB1-202ENST00000439561 GAB2Q9UQC2 676 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 WSB1Q9Y6I7 421 aa7.97□□□□□ -1.13
COPB1-202ENST00000439561 IGKV1D-8A0A087WSZ0 117 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms