RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ZSCAN5BA6NJL1 495 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 PRSS44E7EML9 344 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 LYNX1G3V0Z9 82 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 SPRY3O43610 288 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 LANCL1O43813 399 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 HCKP08631 526 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 LYNX1P0DP58 116 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 RAB3BP20337 219 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ACHEP22303 614 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 DUSP1P28562 367 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 DCTDP32321 178 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 POU3F4P49335 361 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 PRDX4Q13162 271 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 PLCXD3Q63HM9 321 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ZNF57Q68EA5 555 aaPredicted RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 TMEM108Q6UXF1 575 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 TMEM104Q8NE00 496 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 THAP7Q9BT49 309 aaPredicted RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 BANF2Q9H503 90 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ZCCHC4Q9H5U6 513 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 EIF3KQ9UBQ5 218 aaKnown RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 AMDHD2Q9Y303 409 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 A0A0U1RQV5 110 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 NDUFS7O75251 213 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ALX3O95076 343 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 GRPP07492 148 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 BTCP35070 178 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 NPBWR2P48146 333 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 PITPNBP48739 271 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 RAB25P57735 213 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 CCL8P80075 99 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 SFRP4Q6FHJ7 346 aaPredicted RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 THOC7Q6I9Y2 204 aaKnown RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 PYHIN1Q6K0P9 492 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 DOK3Q7L591 496 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR1M1Q8NGA1 313 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 LIN7BQ9HAP6 207 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 ING3Q9NXR8 418 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 V9GYS6 101 aa8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 FLNAP21333 2647 aaKnown RBP8.12□□□□□ -1.11
HMGCLL1-206ENST00000428842 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 ANXA2P2A6NMY6 339 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 SYNGR1O43759 233 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 TIMM8AO60220 97 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 KDM4BO94953 1096 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 NRASP01111 189 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 CD1AP06126 327 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR4A8P0C604 315 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 IGFBP3P17936 291 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 TALDO1P37837 337 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 NKX6-1P78426 367 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 MALLQ13021 153 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 ADIPOQQ15848 244 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 SAMD12Q8N8I0 201 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR2Z1Q8NG97 314 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 LGALS14Q8TCE9 139 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 AKAP1Q92667 903 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 ELL3Q9HB65 397 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 MCUBQ9NWR8 336 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 OTOGQ6ZRI0 2925 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 MYO9AB2RTY4 2548 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 IGKV1-12A0A0C4DH73 117 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 ZNF780AO75290 641 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 IGKV1D-12P01611 117 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 CCL1P22362 96 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 MAB21L1Q13394 359 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR8B8Q15620 311 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 RGS7BPQ6MZT1 257 aaPredicted RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 MEX3BQ6ZN04 569 aaKnown RBP8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 C5orf24Q7Z6I8 188 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 HAVCR2Q8TDQ0 301 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 NICN1Q9BSH3 213 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 WDR13Q9H1Z4 485 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 OBP2BQ9NPH6 170 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 NDRG3Q9UGV2 375 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 DYSFO75923 2080 aa8.11□□□□□ -1.11
HMGCLL1-206ENST00000428842 C7orf66A4D0T2 115 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 WNT9BO14905 357 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 AKR7A2O43488 359 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 CDC14BO60729 498 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 CD2P06729 351 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 COX5BP10606 129 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 HAAOP46952 286 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 MTCP1P56278 107 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 RIPPLY1Q0D2K3 151 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 KISS1Q15726 138 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 SLC22A6Q4U2R8 563 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 NCMAPQ5T1S8 102 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 LAMTOR1Q6IAA8 161 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 ZNF808Q8N4W9 903 aaPredicted RBP8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 BOLLQ8N9W6 283 aaKnown RBP8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR5T2Q8NGG2 359 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR5D14Q8NGL3 314 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
HMGCLL1-206ENST00000428842 ABHD1Q96SE0 405 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms