RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 V9GYS6 101 aa10.54□□□□□ -0.72
GPC1-204ENST00000426280 TRAV40A0A0B4J280 105 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 ZNF816-ZNF321PA0A0X1KG74 233 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 ANXA2P2A6NMY6 339 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 TMPRSS2O15393 492 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 SYNGR1O43759 233 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 CDK1P06493 297 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 MYL12AP19105 171 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 CPT2P23786 658 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 ARF6P62330 175 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 ALKBH1Q13686 389 aaKnown RBP10.53□□□□□ -0.72
GPC1-204ENST00000426280 DGUOKQ16854 277 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 CEACAM21Q3KPI0 293 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 ARMCX4Q5H9R4 360 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 STUMQ69YW2 141 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 Q6ZSR3 168 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 BTN2A1Q7KYR7 527 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 BPIFB2Q8N4F0 458 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 OR10AC1Q8NH08 325 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 MRPL48Q96GC5 212 aaKnown RBP10.53□□□□□ -0.72
GPC1-204ENST00000426280 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 SIRPDQ9H106 197 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 SCN3BQ9NY72 215 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
GPC1-204ENST00000426280 CAB39Q9Y376 341 aaPredicted RBP10.53□□□□□ -0.72
GPC1-204ENST00000426280 OR4C45A6NMZ5 311 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 CCDC159P0C7I6 412 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 MUC1P15941 1255 aaPredicted RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 CRHBPP24387 322 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 GBX2P52951 348 aaPredicted RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 UBA52P62987 128 aaKnown RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 SLC35A2P78381 396 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 MZT1Q08AG7 82 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 RIPPLY1Q0D2K3 151 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 IKZF1Q13422 519 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ATPAF1Q5TC12 328 aaPredicted RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 BTNL3Q6UXE8 466 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 DOK3Q7L591 496 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ZFP41Q8N8Y5 198 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ZNF485Q8NCK3 441 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 LY6G5BQ8NDX9 201 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 OR10Z1Q8NGY1 313 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ANGPTL6Q8NI99 470 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 FAM216AQ8WUB2 273 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ST8SIA4Q92187 359 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 AQP3Q92482 292 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 SUCNR1Q9BXA5 334 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 DUSP21Q9H596 190 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 ELL3Q9HB65 397 aaPredicted RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 CHCHD3Q9NX63 227 aaKnown RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 ZNF391Q9UJN7 358 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 TPRKBQ9Y3C4 175 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 MAB21L2Q9Y586 359 aa10.52□□□□□ -0.73
GPC1-204ENST00000426280 SIRT4Q9Y6E7 314 aaPredicted RBP10.52□□□□□ -0.73
GPC1-204ENST00000426280 IGKV1D-17A0A075B6S4 117 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 CENPVL3A0A0U1RRI6 287 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 A0A1B0GVI7 797 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 LOC107986453A0A1B0GWG9 222 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 TMEM210A6NLX4 147 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 ZNF879B4DU55 563 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 NDUFA2O43678 99 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 ENSAO43768 121 aaKnown RBP10.51□□□□□ -0.73
GPC1-204ENST00000426280 DHRS3O75911 302 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 NRASP01111 189 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 MT-ND2P03891 347 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 PPIAL4GP0DN37 164 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 CCL1P22362 96 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 FPR2P25090 351 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 NPY4RP50391 375 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 MICBQ29980 383 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 DEFB112Q30KQ8 113 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 PLCXD3Q63HM9 321 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 HAGHLQ6PII5 290 aaPredicted RBP10.51□□□□□ -0.73
GPC1-204ENST00000426280 TMPRSS11AQ6ZMR5 421 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 ZNF788Q6ZQV5 615 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 ANGPTL5Q86XS5 388 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 PDZD9Q8IXQ8 264 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 CD177Q8N6Q3 437 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 OR5A2Q8NGI9 324 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 OR51A4Q8NGJ6 313 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 OR52N1Q8NH53 320 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 MYDGFQ969H8 173 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 WDFY2Q96P53 400 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 PDCD1LG2Q9BQ51 273 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 MS4A7Q9GZW8 240 aaPredicted RBP10.51□□□□□ -0.73
GPC1-204ENST00000426280 Q9H521 79 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 RPUSD1Q9UJJ7 312 aaKnown RBP10.51□□□□□ -0.73
GPC1-204ENST00000426280 ZNF222Q9UK12 451 aa10.51□□□□□ -0.73
GPC1-204ENST00000426280 IGKV1-27A0A075B6S5 117 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 TRBV2A0A0J9YWF9 115 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms