RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TMPRSS3P57727 454 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 OR51F2Q8NH61 342 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 ST8SIA4Q92187 359 aa22.78■■□□□ 1.24
LDB1-202ENST00000425280 GPM6AP51674 278 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 MEF2DQ14814 521 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 BEND4Q6ZU67 534 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 C17orf78Q8N4C9 275 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 BPIFB2Q8N4F0 458 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 ZNF611Q8N823 705 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 SLC6A7Q99884 636 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 RAXQ9Y2V3 346 aa22.77■■□□□ 1.24
LDB1-202ENST00000425280 PPP1CBP62140 327 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 ARFRP1Q13795 201 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 ZFP69Q49AA0 526 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 CD276Q5ZPR3 534 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 OR2T2Q6IF00 324 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 TCTE3Q8IZS6 198 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 SNAPC3Q92966 411 aa22.77■■□□□ 1.23
LDB1-202ENST00000425280 DLL1O00548 723 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 SFTPBP07988 381 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 NAT1P18440 290 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 RNASE10Q5GAN6 216 aaKnown RBP22.76■■□□□ 1.23
LDB1-202ENST00000425280 METTL11BQ5VVY1 283 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 SIGIRRQ6IA17 410 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 FBXW12Q6X9E4 464 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 GLDNQ6ZMI3 551 aaPredicted RBP22.76■■□□□ 1.23
LDB1-202ENST00000425280 IDO2Q6ZQW0 420 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 SLC25A26Q70HW3 274 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 BHLHA15Q7RTS1 189 aaPredicted RBP22.76■■□□□ 1.23
LDB1-202ENST00000425280 ZSCAN4Q8NAM6 433 aaPredicted RBP22.76■■□□□ 1.23
LDB1-202ENST00000425280 OCSTAMPQ9BR26 566 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 ING3Q9NXR8 418 aa22.76■■□□□ 1.23
LDB1-202ENST00000425280 ANKRD30BLA7E2S9 258 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 TAF9Q16594 264 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 OR11H7Q8NGC8 314 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 CCDC120Q96HB5 630 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 SEC22CQ9BRL7 303 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 SERPINE3A8MV23 424 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 CSN2P05814 226 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 HOXD4P09016 255 aaPredicted RBP22.75■■□□□ 1.23
LDB1-202ENST00000425280 ARL6IP1Q15041 203 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 NKPD1Q17RQ9 610 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 C6orf201Q7Z4U5 140 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 OSR2Q8N2R0 312 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 PIAS4Q8N2W9 510 aaPredicted RBP22.75■■□□□ 1.23
LDB1-202ENST00000425280 OR5A2Q8NGI9 324 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 OR5P3Q8WZ94 311 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 FBXW5Q969U6 566 aa22.75■■□□□ 1.23
LDB1-202ENST00000425280 ZNF732B4DXR9 585 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 DISC1C4P0D8 188 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 IL5P05113 134 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 CEACAM8P31997 349 aaPredicted RBP22.74■■□□□ 1.23
LDB1-202ENST00000425280 HRH1P35367 487 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 ERVS71-1P61550 626 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 PIGYQ3MUY2 71 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 FBXL14Q8N1E6 418 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 MRPS24Q96EL2 167 aaKnown RBP22.74■■□□□ 1.23
LDB1-202ENST00000425280 HIST1H2AAQ96QV6 131 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 OR2J1Q9GZK6 312 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 MOV10Q9HCE1 1003 aaKnown RBP22.74■■□□□ 1.23
LDB1-202ENST00000425280 ZNF581Q9P0T4 197 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 SCP2D1Q9UJQ7 156 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 MPC1Q9Y5U8 109 aa22.74■■□□□ 1.23
LDB1-202ENST00000425280 RLN1P04808 185 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 FAM87AP0C7U9 286 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 VSIG10L2P0DP72 767 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 TBPP20226 339 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 CBX5P45973 191 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 HAAOP46952 286 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 UCP2P55851 309 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 ZNF474Q6S9Z5 364 aaPredicted RBP22.73■■□□□ 1.23
LDB1-202ENST00000425280 SLC36A1Q7Z2H8 476 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 MED30Q96HR3 178 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 OBP2BQ9NPH6 170 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 PLEKHJ1Q9NW61 149 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 PLEKHA6Q9Y2H5 1048 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 BSNQ9UPA5 3926 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 PTPRQQ9UMZ3 2332 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 AKR7A2O43488 359 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 CA11O75493 328 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 MPZP25189 248 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 UCNP55089 124 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 NKAPLQ5M9Q1 402 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 PCDHB16Q9NRJ7 776 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 SLC2A8Q9NY64 477 aa22.73■■□□□ 1.23
LDB1-202ENST00000425280 OR5H1A6NKK0 313 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SSNA1O43805 119 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 GLI4P10075 376 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 MAB21L1Q13394 359 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SCGB2B2Q4G0G5 96 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 OR4K15Q8NH41 348 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SLC25A40Q8TBP6 338 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SLC25A21Q9BQT8 299 aaPredicted RBP22.72■■□□□ 1.23
LDB1-202ENST00000425280 SFXN3Q9BWM7 321 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 ATMQ13315 3056 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 GEMIN2O14893 280 aaKnown RBP22.72■■□□□ 1.23
LDB1-202ENST00000425280 NPBWR2P48146 333 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 KCNJ8Q15842 424 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SAXO1Q8IYX7 474 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 OR13C8Q8NGS7 320 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms