RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 OR14J1Q9UGF5 321 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 BAIAP2Q9UQB8 552 aa6.53□□□□□ -1.36
VIM-202ENST00000421459 SAMHD1Q9Y3Z3 626 aaKnown RBP6.53□□□□□ -1.36
VIM-202ENST00000421459 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 PRR23D1E9PI22 279 aaPredicted RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 H3BN98 237 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 H3BSH0 61 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 K7EIL1 84 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 XPNPEP2O43895 674 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 DCTN3O75935 186 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 ARG1P05089 322 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 PRR23D2P0DMB1 279 aaPredicted RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 CD24P25063 80 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 MAP2K3P46734 347 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 BLVRAP53004 296 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 KRTAP10-11P60412 298 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 PSMA6P60900 246 aaKnown RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 EMX1Q04741 257 aaPredicted RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 MFGE8Q08431 387 aaPredicted RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 GINS1Q14691 196 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 CNN3Q15417 329 aaKnown RBP6.52□□□□□ -1.37
VIM-202ENST00000421459 AANATQ16613 207 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 ZSCAN26Q16670 478 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 OR2T5Q6IEZ7 315 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 C11orf88Q6PI97 169 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 C10orf99Q6UWK7 81 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 TRPM8Q7Z2W7 1104 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 KRT77Q7Z794 578 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 COMMD2Q86X83 199 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 ANGPTL5Q86XS5 388 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 NDUFA11Q86Y39 141 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 CPOQ8IVL8 374 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 HS3ST5Q8IZT8 346 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 Q8N2B8 174 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 FTMTQ8N4E7 242 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 POC1AQ8NBT0 407 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 OR4S1Q8NGB4 309 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 OR2T29Q8NH02 315 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 OR5K1Q8NHB7 308 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 ZNF671Q8TAW3 534 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 TEX47Q8TBZ9 253 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 OR8B4Q96RC9 309 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 WNT10AQ9GZT5 417 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 PBOV1Q9GZY1 135 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 C1orf21Q9H246 121 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 RAB18Q9NP72 206 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 GPR84Q9NQS5 396 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 COPS3Q9UNS2 423 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 TCF19Q9Y242 345 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 PIGLQ9Y2B2 252 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 HILPDAQ9Y5L2 63 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
VIM-202ENST00000421459 TMEM269A0A1B0GVZ9 245 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 WI2-2373I1.2A0A1W2PRP0 233 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 SH2D7A6NKC9 451 aaPredicted RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 F8VVB4 439 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 F8VWA3 439 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 SLC1A7O00341 560 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 EBAG9O00559 213 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 TK1P04183 234 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 PGA5P0DJD9 388 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 CD33P20138 364 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ALOX5APP20292 161 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 PRKACGP22612 351 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 HAAOP46952 286 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 RPS7P62081 194 aaKnown RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 RIPPLY1Q0D2K3 151 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 DYNC1I2Q13409 638 aaKnown RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 SNCBQ16143 134 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ARSJQ5FYB0 599 aaPredicted RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 DEFB121Q5J5C9 76 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 VAX1Q5SQQ9 334 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 BAIAP2L2Q6UXY1 529 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 PLEKHG7Q6ZR37 379 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 CCDC121Q6ZUS5 278 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ASRGL1Q7L266 308 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 KRT74Q7RTS7 529 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 BCDIN3DQ7Z5W3 292 aaKnown RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 ZNF561Q8N587 486 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 TPRX1Q8N7U7 411 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ZNF454Q8N9F8 522 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 PAPD5Q8NDF8 572 aaKnown RBP6.51□□□□□ -1.37
VIM-202ENST00000421459 OR5A2Q8NGI9 324 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 OCSTAMPQ9BR26 566 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 MUC13Q9H3R2 512 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 REEP1Q9H902 201 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ABCB9Q9NP78 766 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 USE1Q9NZ43 259 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 ACTR3BQ9P1U1 418 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 TAGLN3Q9UI15 199 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 LAMP5Q9UJQ1 280 aa6.51□□□□□ -1.37
VIM-202ENST00000421459 PLXNB1O43157 2135 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
VIM-202ENST00000421459 A0A0U1RQV5 110 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 PQLC2LA1A4F0 135 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 CCDC182A6NF36 153 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 C17orf98A8MV24 154 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 VGLL3A8MV65 326 aa6.5□□□□□ -1.37
VIM-202ENST00000421459 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms