RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RAB13P51153 203 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 RIPPLY1Q0D2K3 151 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZBTB37Q5TC79 503 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 PLCXD3Q63HM9 321 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 RPS4Y2Q8TD47 263 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 FOXRED1Q96CU9 486 aaPredicted RBP13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 MALSU1Q96EH3 234 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 FEVQ99581 238 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 WNT10AQ9GZT5 417 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 C1orf21Q9H246 121 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 MED4Q9NPJ6 270 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 ARL8BQ9NVJ2 186 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 FAM206AQ9NX38 181 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 TAS2R1Q9NYW7 299 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 PITPNC1Q9UKF7 332 aa13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 TBL2Q9Y4P3 447 aaKnown RBP13.61□□□□□ -0.23
UPF3AP3-201ENST00000420996 TMEM269A0A1B0GVZ9 245 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 C17orf98A8MV24 154 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 NOS1APO75052 506 aaPredicted RBP13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 PGA5P0DJD9 388 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 GK3PQ14409 553 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF273Q14593 569 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 FAM98BQ52LJ0 330 aaKnown RBP13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 PLA1AQ53H76 456 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 SLC35D3Q5M8T2 416 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 DEGS2Q6QHC5 323 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 TMEM219Q86XT9 240 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 GIPC3Q8TF64 312 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF488Q96MN9 340 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 LAMP5Q9UJQ1 280 aa13.6□□□□□ -0.23
UPF3AP3-201ENST00000420996 J3QT63 122 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 SYNGR1O43759 233 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 PEX14O75381 377 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 NRASP01111 189 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 IGLV3-1P01715 115 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 TK1P04183 234 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 HMGN1P05114 100 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 CEBPDP49716 269 aaPredicted RBP13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 DLX6P56179 175 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 GINS1Q14691 196 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF684Q5T5D7 378 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 KCTD18Q6PI47 426 aaPredicted RBP13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 CPOQ8IVL8 374 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 OR8B4Q96RC9 309 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 TEAD3Q99594 435 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 PBOV1Q9GZY1 135 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 MUC13Q9H3R2 512 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 ENPP5Q9UJA9 477 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 PIGLQ9Y2B2 252 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 POLDIP2Q9Y2S7 368 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 DSCAML1Q8TD84 2053 aa13.59□□□□□ -0.23
UPF3AP3-201ENST00000420996 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 ODF3BA8MYP8 253 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 NXPH2O95156 264 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 RBP4P02753 201 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 ARG1P05089 322 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 HAAOP46952 286 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 DYNLT3P51808 116 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 HCCSP53701 268 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 SSX2Q16385 188 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 VAX1Q5SQQ9 334 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 LCN1P1Q5VSP4 162 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 ZNF626Q68DY1 528 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 LCN8Q6JVE9 175 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 DHFR2Q86XF0 187 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 OR11H6Q8NGC7 330 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 OR13D1Q8NGV5 346 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 OR5M11Q96RB7 305 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 NRIP2Q9BQI9 281 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 MROQ9BYG7 248 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 YIPF3Q9GZM5 350 aa13.58□□□□□ -0.24
UPF3AP3-201ENST00000420996 K7N7A8 449 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 PSMD9O00233 223 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 ZNF254O75437 659 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 DHRS3O75911 302 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 ALDOBP05062 364 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 ZNF728P0DKX0 622 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 PIPP12273 146 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 CD33P20138 364 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 SLC2A5P22732 501 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 RPS7P62081 194 aaKnown RBP13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 BLCAPP62952 87 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 CDK5Q00535 292 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 ARSJQ5FYB0 599 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 LDLRAD2Q5SZI1 272 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 Q6ZS46 218 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 HES4Q9HCC6 221 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 OR14J1Q9UGF5 321 aa13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 NUFIP1Q9UHK0 495 aaKnown RBP13.57□□□□□ -0.24
UPF3AP3-201ENST00000420996 PQLC2LA1A4F0 135 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms