RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PKD1L2Q7Z442 2459 aa18■□□□□ 0.47
GPC1-202ENST00000420138 NBEAQ8NFP9 2946 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 MSTNO14793 375 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 GNB3P16520 340 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 SERPINA2P20848 420 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 IL32P24001 234 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 ATP1B3P54709 279 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 UCP2P55851 309 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 PPP1CBP62140 327 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 ST3GAL2Q16842 350 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 CALHM1Q8IU99 346 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 FAM169BQ8N8A8 192 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 OR2J1Q9GZK6 312 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 EIF3KQ9UBQ5 218 aaKnown RBP17.99■□□□□ 0.47
GPC1-202ENST00000420138 AMDHD2Q9Y303 409 aa17.99■□□□□ 0.47
GPC1-202ENST00000420138 IGHV1-18A0A0C4DH31 117 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 PLATP00750 562 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 PDZK1IP1Q13113 114 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 CEACAM21Q3KPI0 293 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 OR2T2Q6IF00 324 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 FAAP20Q6NZ36 180 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 PCSK4Q6UW60 755 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 CHST4Q8NCG5 386 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 BHLHE23Q8NDY6 225 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 S100PBPQ96BU1 408 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 CCDC120Q96HB5 630 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 FAM210AQ96ND0 272 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 URM1Q9BTM9 101 aaKnown RBP17.98■□□□□ 0.47
GPC1-202ENST00000420138 OR10A4Q9H209 315 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 SH3BGRL2Q9UJC5 107 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 FLVCR2Q9UPI3 526 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 ACACBO00763 2458 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 BMP5P22003 454 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 OPRM1P35372 400 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 ZDHHC23Q8IYP9 409 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 PXT1Q8NFP0 134 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 OR11H7Q8NGC8 314 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 DVL3Q92997 716 aaPredicted RBP17.98■□□□□ 0.47
GPC1-202ENST00000420138 DACT3Q96B18 629 aaPredicted RBP17.98■□□□□ 0.47
GPC1-202ENST00000420138 S100A13Q99584 98 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 METTL9Q9H1A3 318 aa17.98■□□□□ 0.47
GPC1-202ENST00000420138 SHANK1Q9Y566 2161 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 NDUFB6O95139 128 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 TIMM23BQ5SRD1 257 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 FTMTQ8N4E7 242 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 OR56B1Q8NGI3 324 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 OR51T1Q8NGJ9 327 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 SLC25A40Q8TBP6 338 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 Q96M66 194 aa17.97■□□□□ 0.47
GPC1-202ENST00000420138 ELL3Q9HB65 397 aaPredicted RBP17.97■□□□□ 0.47
GPC1-202ENST00000420138 A0A1B0GUH1 482 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 MFNGO00587 321 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 ARPC1BO15143 372 aaKnown RBP17.96■□□□□ 0.47
GPC1-202ENST00000420138 SSX5O60225 188 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 FCER2P06734 321 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 HIST1H1DP16402 221 aaKnown RBP17.96■□□□□ 0.47
GPC1-202ENST00000420138 FAM189A2Q15884 450 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 FJX1Q86VR8 437 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 STEAP2Q8NFT2 490 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 BEST4Q8NFU0 473 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 OR4D10Q8NGI6 311 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 ZFAND1Q8TCF1 268 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 OR5P3Q8WZ94 311 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 RAB3CQ96E17 227 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 BEX1Q9HBH7 125 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 IL36GQ9NZH8 169 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 ZNF222Q9UK12 451 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 BOLA1Q9Y3E2 137 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 ATRXP46100 2492 aa17.96■□□□□ 0.47
GPC1-202ENST00000420138 SFTPBP07988 381 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 AKAIN1P0CW23 69 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 CALCRP30988 508 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ACTBP60709 375 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ACTG1P63261 375 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 FAM27E3Q08E93 113 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 METTL11BQ5VVY1 283 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 OR4C16Q8NGL9 310 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 OR1J1Q8NGS3 322 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 NUDCD2Q8WVJ2 157 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ARHGAP5-AS1Q96IT6 56 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 TMEM246Q9BRR3 403 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 PIGMQ9H3S5 423 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 PLSCR3Q9NRY6 295 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 MYO7BQ6PIF6 2116 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 IGHV2OR16-5A0A0B4J2B6 119 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 SSNA1O43805 119 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 CD3DP04234 171 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 SULT1A3P0DMM9 295 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 SULT1A4P0DMN0 295 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ANXA3P12429 323 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 GTF2F2P13984 249 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 GPM6AP51674 278 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 RSU1Q15404 277 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ALKBH6Q3KRA9 238 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 ZNF782Q6ZMW2 699 aaPredicted RBP17.95■□□□□ 0.46
GPC1-202ENST00000420138 ZNF611Q8N823 705 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 OR5A2Q8NGI9 324 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 MARS2Q96GW9 593 aaKnown RBP17.95■□□□□ 0.46
GPC1-202ENST00000420138 MPC1Q9Y5U8 109 aa17.95■□□□□ 0.46
GPC1-202ENST00000420138 TPRP12270 2363 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms